Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4d20
         (308 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011381-1|AAR96173.1| 1369|Drosophila melanogaster LD36213p pro...    27   3.6  
AE014134-199|AAF51421.1| 1369|Drosophila melanogaster CG4644-PA ...    27   3.6  
AE014134-1648|AAS64665.1| 1136|Drosophila melanogaster CG3811-PD...    26   8.2  
AE014134-1647|AAS64664.1| 1197|Drosophila melanogaster CG3811-PC...    26   8.2  
AE014134-1646|AAN10695.1| 1197|Drosophila melanogaster CG3811-PB...    26   8.2  
AE014134-1645|AAF52781.2| 1197|Drosophila melanogaster CG3811-PA...    26   8.2  

>BT011381-1|AAR96173.1| 1369|Drosophila melanogaster LD36213p protein.
          Length = 1369

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 78   NYTSNQH*NAQNQDKQVNL*KKIISCSFWCKIIYLIYLLDHY 203
            N TS++    Q +DK  +  K+    S WC  +Y + L  HY
Sbjct: 879  NATSSEDRAKQFRDKLGHRRKQAEMYSLWCDALYRLSLAQHY 920


>AE014134-199|AAF51421.1| 1369|Drosophila melanogaster CG4644-PA
            protein.
          Length = 1369

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 78   NYTSNQH*NAQNQDKQVNL*KKIISCSFWCKIIYLIYLLDHY 203
            N TS++    Q +DK  +  K+    S WC  +Y + L  HY
Sbjct: 879  NATSSEDRAKQFRDKLGHRRKQAEMYSLWCDALYRLSLAQHY 920


>AE014134-1648|AAS64665.1| 1136|Drosophila melanogaster CG3811-PD,
           isoform D protein.
          Length = 1136

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 81  YTSNQH*NAQNQDKQVNL*KKIISCSFWCKII 176
           YTSN+H +   Q  QVNL     +C+F C+ +
Sbjct: 555 YTSNKHGSTLEQPFQVNL---TAACNFGCECL 583


>AE014134-1647|AAS64664.1| 1197|Drosophila melanogaster CG3811-PC,
           isoform C protein.
          Length = 1197

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 81  YTSNQH*NAQNQDKQVNL*KKIISCSFWCKII 176
           YTSN+H +   Q  QVNL     +C+F C+ +
Sbjct: 616 YTSNKHGSTLEQPFQVNL---TAACNFGCECL 644


>AE014134-1646|AAN10695.1| 1197|Drosophila melanogaster CG3811-PB,
           isoform B protein.
          Length = 1197

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 81  YTSNQH*NAQNQDKQVNL*KKIISCSFWCKII 176
           YTSN+H +   Q  QVNL     +C+F C+ +
Sbjct: 616 YTSNKHGSTLEQPFQVNL---TAACNFGCECL 644


>AE014134-1645|AAF52781.2| 1197|Drosophila melanogaster CG3811-PA,
           isoform A protein.
          Length = 1197

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 81  YTSNQH*NAQNQDKQVNL*KKIISCSFWCKII 176
           YTSN+H +   Q  QVNL     +C+F C+ +
Sbjct: 616 YTSNKHGSTLEQPFQVNL---TAACNFGCECL 644


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,888,118
Number of Sequences: 53049
Number of extensions: 171744
Number of successful extensions: 337
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 589756776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)