Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4d16
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.5  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 7/29 (24%), Positives = 14/29 (48%)
 Frame = +2

Query: 17  KYFLSAIFLIIVFMYAMYFCISIVVNNGR 103
           +Y   A+ L   F Y  + C+ + +  G+
Sbjct: 144 EYLAEAVQLYFQFYYTYFLCVIVCIFRGK 172


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
          protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 28 ICYFSNHSVY 57
          +CYFSN ++Y
Sbjct: 25 VCYFSNWAIY 34


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 105 TRPLFTTIEMQKYIAYINTMIRKIADRKY 19
           T+ +   I +++  A IN+++RK+   KY
Sbjct: 470 TQFVVANIILRRRFALINSILRKLYKNKY 498


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -2

Query: 437 LSILTSCSCLYTSTELNFGNCFLSMYNRSSSVGTYTIKFSI 315
           LSI+ +CS + +  E  +   FL+ Y    +   +++  +I
Sbjct: 329 LSIVNTCSQIPSEVEDKYTTYFLNTYPHLFNFFEFSVPLAI 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,183
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)