Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4d16
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.65 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.0  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   3.5  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    24   4.6  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    23   8.0  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 26.6 bits (56), Expect = 0.65
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -2

Query: 485 GFQYTMVADAVFFGDRLSILTSCSCLYTSTELNFGNCFLSMYNRSSSVGTYTIK 324
           G +Y  +A+A ++G  +        +YT+ E+  GN        S  VGT  +K
Sbjct: 523 GREYADIANA-YYGPVIENFNCDKSIYTAVEVTAGNRLFHHIVESDRVGTQILK 575


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 217  MECPFQIQVCISDRFFAFPHNLVEPQSDVXNKLIEN 324
            +E  F  Q+   +RFFAF +  +E    +  K  E+
Sbjct: 1032 LEGQFMFQIFNGERFFAFNNQTIEQFPSLVKKYFED 1067


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 206 YTSRWNARFRFKFVLA 253
           YT R  ARFRF+F+ A
Sbjct: 275 YTVRRGARFRFRFINA 290


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 209 TSRWNARFRFKFVLAIAFLRFLTIW 283
           T R +   +FKFV A  F R   IW
Sbjct: 166 TGRGDVPAKFKFVFADKFARKFMIW 190


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 316 LICCXRRFAVPPNCEETQKSDR*Y 245
           L+CC + F+  P C   Q +DR Y
Sbjct: 86  LLCCPK-FSNSPTCGAQQLADRIY 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,602
Number of Sequences: 2352
Number of extensions: 13340
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)