Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4d15
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   2.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   6.7  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    23   8.8  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 112 HDPYDGYYDRSRFDSPRDLFERRYPVGGAS 201
           H+PYD Y D S   SP   F   + +GG +
Sbjct: 250 HEPYDIYVDPS--SSPTPSFGSDHGIGGVT 277


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 120  WIMGYYVQRITIYNTS*KYEHQID 49
            W +G Y  R+T Y  S  Y H I+
Sbjct: 1865 WQVGNYEHRLTTYTYSETYGHLIE 1888


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 118  PYDGYYDRSRFDSPRDLFERRYPV 189
            PY  YY+ S + S R    + YP+
Sbjct: 1603 PYFDYYNASFYGSDRSFAIQNYPI 1626


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 673 YEKTYDIYFNYLHHKCSQ 620
           Y    DIY+NY + +C Q
Sbjct: 120 YRDCPDIYWNYQNDRCGQ 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,254
Number of Sequences: 2352
Number of extensions: 13383
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)