Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4d15
(676 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding pr... 48 1e-05
AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p pro... 48 1e-05
AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE... 48 1e-05
AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD... 48 1e-05
AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC... 48 1e-05
AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB... 48 1e-05
AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA... 48 1e-05
BT024975-1|ABE01205.1| 1027|Drosophila melanogaster IP14862p pro... 29 5.8
BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p pro... 29 5.8
AF334032-1|AAK09434.1| 1549|Drosophila melanogaster no-mechanore... 29 5.8
AF334031-1|AAK09433.1| 1557|Drosophila melanogaster no-mechanore... 29 5.8
AE013599-1269|AAM68729.1| 1557|Drosophila melanogaster CG13207-P... 29 5.8
AE013599-1268|AAF58668.2| 1557|Drosophila melanogaster CG13207-P... 29 5.8
AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-P... 29 5.8
AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-P... 29 5.8
>U59476-1|AAB07067.1| 352|Drosophila melanogaster RNA-binding
protein lark protein.
Length = 352
Score = 48.0 bits (109), Expect = 1e-05
Identities = 43/112 (38%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 121 YDGYYDRSRFDSPRDLFERRYPVGGASRGLELGGSRGARGDFVSXXXXXXXXXXXXXXXX 300
YD YYDR RF+ RDL+ERRY SR DF
Sbjct: 236 YD-YYDR-RFEDSRDLYERRYQT-----------SR--MRDFPPPPISRREPMPLPPTLS 280
Query: 301 XXSGMGSMRSSYDPMYSRRSPPPGPQMSRGM----------YEDFSRDTFDD 426
S+ YD M+SRRSPPP P+ S GM YEDFSRD FD+
Sbjct: 281 GSLRSCSVSRGYDTMFSRRSPPP-PRSSNGMSRYGSPTPHGYEDFSRDAFDE 331
>AY061458-1|AAL29006.1| 352|Drosophila melanogaster LD40792p
protein.
Length = 352
Score = 48.0 bits (109), Expect = 1e-05
Identities = 43/112 (38%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 121 YDGYYDRSRFDSPRDLFERRYPVGGASRGLELGGSRGARGDFVSXXXXXXXXXXXXXXXX 300
YD YYDR RF+ RDL+ERRY SR DF
Sbjct: 236 YD-YYDR-RFEDSRDLYERRYQT-----------SR--MRDFPPPPISRREPMPLPPTLS 280
Query: 301 XXSGMGSMRSSYDPMYSRRSPPPGPQMSRGM----------YEDFSRDTFDD 426
S+ YD M+SRRSPPP P+ S GM YEDFSRD FD+
Sbjct: 281 GSLRSCSVSRGYDTMFSRRSPPP-PRSSNGMSRYGSPTPHGYEDFSRDAFDE 331
>AE014296-1235|AAN12056.1| 352|Drosophila melanogaster CG8597-PE,
isoform E protein.
Length = 352
Score = 48.0 bits (109), Expect = 1e-05
Identities = 43/112 (38%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 121 YDGYYDRSRFDSPRDLFERRYPVGGASRGLELGGSRGARGDFVSXXXXXXXXXXXXXXXX 300
YD YYDR RF+ RDL+ERRY SR DF
Sbjct: 236 YD-YYDR-RFEDSRDLYERRYQT-----------SR--MRDFPPPPISRREPMPLPPTLS 280
Query: 301 XXSGMGSMRSSYDPMYSRRSPPPGPQMSRGM----------YEDFSRDTFDD 426
S+ YD M+SRRSPPP P+ S GM YEDFSRD FD+
Sbjct: 281 GSLRSCSVSRGYDTMFSRRSPPP-PRSSNGMSRYGSPTPHGYEDFSRDAFDE 331
>AE014296-1234|AAN12055.1| 352|Drosophila melanogaster CG8597-PD,
isoform D protein.
Length = 352
Score = 48.0 bits (109), Expect = 1e-05
Identities = 43/112 (38%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 121 YDGYYDRSRFDSPRDLFERRYPVGGASRGLELGGSRGARGDFVSXXXXXXXXXXXXXXXX 300
YD YYDR RF+ RDL+ERRY SR DF
Sbjct: 236 YD-YYDR-RFEDSRDLYERRYQT-----------SR--MRDFPPPPISRREPMPLPPTLS 280
Query: 301 XXSGMGSMRSSYDPMYSRRSPPPGPQMSRGM----------YEDFSRDTFDD 426
S+ YD M+SRRSPPP P+ S GM YEDFSRD FD+
Sbjct: 281 GSLRSCSVSRGYDTMFSRRSPPP-PRSSNGMSRYGSPTPHGYEDFSRDAFDE 331
>AE014296-1233|AAN12054.1| 352|Drosophila melanogaster CG8597-PC,
isoform C protein.
Length = 352
Score = 48.0 bits (109), Expect = 1e-05
Identities = 43/112 (38%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 121 YDGYYDRSRFDSPRDLFERRYPVGGASRGLELGGSRGARGDFVSXXXXXXXXXXXXXXXX 300
YD YYDR RF+ RDL+ERRY SR DF
Sbjct: 236 YD-YYDR-RFEDSRDLYERRYQT-----------SR--MRDFPPPPISRREPMPLPPTLS 280
Query: 301 XXSGMGSMRSSYDPMYSRRSPPPGPQMSRGM----------YEDFSRDTFDD 426
S+ YD M+SRRSPPP P+ S GM YEDFSRD FD+
Sbjct: 281 GSLRSCSVSRGYDTMFSRRSPPP-PRSSNGMSRYGSPTPHGYEDFSRDAFDE 331
>AE014296-1232|AAN12053.1| 352|Drosophila melanogaster CG8597-PB,
isoform B protein.
Length = 352
Score = 48.0 bits (109), Expect = 1e-05
Identities = 43/112 (38%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 121 YDGYYDRSRFDSPRDLFERRYPVGGASRGLELGGSRGARGDFVSXXXXXXXXXXXXXXXX 300
YD YYDR RF+ RDL+ERRY SR DF
Sbjct: 236 YD-YYDR-RFEDSRDLYERRYQT-----------SR--MRDFPPPPISRREPMPLPPTLS 280
Query: 301 XXSGMGSMRSSYDPMYSRRSPPPGPQMSRGM----------YEDFSRDTFDD 426
S+ YD M+SRRSPPP P+ S GM YEDFSRD FD+
Sbjct: 281 GSLRSCSVSRGYDTMFSRRSPPP-PRSSNGMSRYGSPTPHGYEDFSRDAFDE 331
>AE014296-1231|AAF50578.1| 352|Drosophila melanogaster CG8597-PA,
isoform A protein.
Length = 352
Score = 48.0 bits (109), Expect = 1e-05
Identities = 43/112 (38%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Frame = +1
Query: 121 YDGYYDRSRFDSPRDLFERRYPVGGASRGLELGGSRGARGDFVSXXXXXXXXXXXXXXXX 300
YD YYDR RF+ RDL+ERRY SR DF
Sbjct: 236 YD-YYDR-RFEDSRDLYERRYQT-----------SR--MRDFPPPPISRREPMPLPPTLS 280
Query: 301 XXSGMGSMRSSYDPMYSRRSPPPGPQMSRGM----------YEDFSRDTFDD 426
S+ YD M+SRRSPPP P+ S GM YEDFSRD FD+
Sbjct: 281 GSLRSCSVSRGYDTMFSRRSPPP-PRSSNGMSRYGSPTPHGYEDFSRDAFDE 331
>BT024975-1|ABE01205.1| 1027|Drosophila melanogaster IP14862p
protein.
Length = 1027
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 115 DPYDGYYDRSRFDSPRDLFERRYPVGGASRG 207
+PY G DR R+ P D + RYP GG G
Sbjct: 516 NPYGGDRDRDRY--PPDRYGSRYPTGGDGIG 544
>BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p
protein.
Length = 1549
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 115 DPYDGYYDRSRFDSPRDLFERRYPVGGASRG 207
+PY G DR R+ P D + RYP GG G
Sbjct: 516 NPYGGDRDRDRY--PPDRYGSRYPTGGDGIG 544
>AF334032-1|AAK09434.1| 1549|Drosophila melanogaster
no-mechanoreceptor potential Ashort isoform protein.
Length = 1549
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 115 DPYDGYYDRSRFDSPRDLFERRYPVGGASRG 207
+PY G DR R+ P D + RYP GG G
Sbjct: 516 NPYGGDRDRDRY--PPDRYGSRYPTGGDGIG 544
>AF334031-1|AAK09433.1| 1557|Drosophila melanogaster
no-mechanoreceptor potential Along isoform protein.
Length = 1557
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 115 DPYDGYYDRSRFDSPRDLFERRYPVGGASRG 207
+PY G DR R+ P D + RYP GG G
Sbjct: 516 NPYGGDRDRDRY--PPDRYGSRYPTGGDGIG 544
>AE013599-1269|AAM68729.1| 1557|Drosophila melanogaster CG13207-PB,
isoform B protein.
Length = 1557
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 115 DPYDGYYDRSRFDSPRDLFERRYPVGGASRG 207
+PY G DR R+ P D + RYP GG G
Sbjct: 516 NPYGGDRDRDRY--PPDRYGSRYPTGGDGIG 544
>AE013599-1268|AAF58668.2| 1557|Drosophila melanogaster CG13207-PA,
isoform A protein.
Length = 1557
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 115 DPYDGYYDRSRFDSPRDLFERRYPVGGASRG 207
+PY G DR R+ P D + RYP GG G
Sbjct: 516 NPYGGDRDRDRY--PPDRYGSRYPTGGDGIG 544
>AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-PD,
isoform D protein.
Length = 1549
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 115 DPYDGYYDRSRFDSPRDLFERRYPVGGASRG 207
+PY G DR R+ P D + RYP GG G
Sbjct: 516 NPYGGDRDRDRY--PPDRYGSRYPTGGDGIG 544
>AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-PC,
isoform C protein.
Length = 1549
Score = 29.1 bits (62), Expect = 5.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 115 DPYDGYYDRSRFDSPRDLFERRYPVGGASRG 207
+PY G DR R+ P D + RYP GG G
Sbjct: 516 NPYGGDRDRDRY--PPDRYGSRYPTGGDGIG 544
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,451,776
Number of Sequences: 53049
Number of extensions: 623165
Number of successful extensions: 1914
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1906
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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