Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4d09
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   0.99 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   1.7  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   3.0  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   3.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   3.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    23   3.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.0  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.2  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 367 PWRFRAYTTSIAVTVFLLACSVYV 296
           PW  RAY T  +++VF++   V +
Sbjct: 197 PWGKRAYVTWYSISVFMVPLVVLI 220


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/38 (26%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 550 FQELFA-VVDVVNQSQVTLVRLIIIKFFVLEYKQTKAL 660
           F ++F  ++ ++  +   L+ + + +  +LEYK+TK L
Sbjct: 276 FHDIFLPLLCILTNTLEILITVTVCELTILEYKRTKKL 313


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/38 (26%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 550 FQELFA-VVDVVNQSQVTLVRLIIIKFFVLEYKQTKAL 660
           F ++F  ++ ++  +   L+ + + +  +LEYK+TK L
Sbjct: 101 FHDIFLPLLCILTNTLEILITVTVCELTILEYKRTKKL 138


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = -2

Query: 176 RDALDVITQHLPVTFSAPLSKTFASFTATGHLDELLGLCFVLV 48
           R AL V T     T  +  +      +    +D  LG CFV+V
Sbjct: 99  RVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMV 141


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +1

Query: 454 FFNYTDNRAMTDN*QQR*QQASNTRRGPSRNMFQELFAV 570
           ++NYT +R + D   Q+ ++     +  S+  F+EL A+
Sbjct: 353 YYNYTVDRDLQDEVSQKIRKYYLGEKKLSKKTFRELVAM 391


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +1

Query: 454 FFNYTDNRAMTDN*QQR*QQASNTRRGPSRNMFQELFAV 570
           ++NYT +R + D   Q+ ++     +  S+  F+EL A+
Sbjct: 353 YYNYTVDRDLQDEVSQKIRKYYLGEKKLSKKTFRELVAM 391


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +1

Query: 454 FFNYTDNRAMTDN*QQR*QQASNTRRGPSRNMFQELFAV 570
           ++NYT +R + D   Q+ ++     +  S+  F+EL A+
Sbjct: 353 YYNYTVDRDLQDEVSQKIRKYYLGEKKLSKRTFRELVAM 391


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +1

Query: 535 PSRNMFQELFAVVDVVNQSQVTLVRLIIIKFFVLEYKQTKALF 663
           P +      + V+D  +   V  + LI+ KFF   ++QT A++
Sbjct: 621 PHQQHLDAWYWVMDWSDMLSVGNMTLILDKFFFPRWRQTLAMW 663


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +1

Query: 454 FFNYTDNRAMTDN*QQR*QQASNTRRGPSRNMFQEL 561
           ++NYT +R + D   Q+ ++     +  S+  F+EL
Sbjct: 353 YYNYTVDRDLQDEVSQKIRKYYLGEKKLSKKTFREL 388


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,745
Number of Sequences: 336
Number of extensions: 2797
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)