Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4d09
(672 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 167 7e-42
09_06_0213 - 21610887-21611198 167 7e-42
09_04_0227 + 15861410-15861721 167 7e-42
07_03_0825 + 21773710-21774021 167 7e-42
05_05_0150 + 22758060-22758371 167 7e-42
05_05_0128 - 22591720-22592031 167 7e-42
04_04_0926 - 29462363-29462674 167 7e-42
03_01_0134 + 1060551-1060862 167 7e-42
02_05_0333 - 28012829-28013140 167 7e-42
01_06_1262 + 35833882-35834193 167 7e-42
05_05_0130 - 22598744-22599043,22599296-22599307 136 2e-32
05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744... 30 1.9
12_02_1260 - 27395754-27397499 29 3.4
07_03_0162 - 14565165-14565350,14565757-14566131,14566287-14566922 29 3.4
03_02_0004 - 4869853-4871106 29 3.4
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 28 5.9
01_01_0819 - 6387000-6387300,6387685-6387843,6387925-6388100,638... 28 7.8
>10_08_0780 - 20500344-20500655
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>09_06_0213 - 21610887-21611198
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>09_04_0227 + 15861410-15861721
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>07_03_0825 + 21773710-21774021
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>05_05_0150 + 22758060-22758371
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>05_05_0128 - 22591720-22592031
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>04_04_0926 - 29462363-29462674
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>03_01_0134 + 1060551-1060862
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>02_05_0333 - 28012829-28013140
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>01_06_1262 + 35833882-35834193
Length = 103
Score = 167 bits (406), Expect = 7e-42
Identities = 80/82 (97%), Positives = 82/82 (100%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82 VTAMDVVYALKRQGRTLYGFGG 103
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 136 bits (329), Expect = 2e-32
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
V R IQGI KP IRRLAR+GGVKRISGLIY+ETRGVL++FL+NVI DA+TYTEHA RKT
Sbjct: 22 VFRGYIQGIAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLKNVICDAITYTEHAHRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
V AMDVVYALK QGRT+Y FGG
Sbjct: 82 VMAMDVVYALKLQGRTIYDFGG 103
>05_04_0209 -
19073147-19074041,19074117-19074163,19074258-19074437,
19074839-19074955,19075105-19075227,19075391-19075776,
19076177-19076303,19077140-19077202,19078035-19078086,
19078189-19080023
Length = 1274
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVT 299
+LR T +R R+ V R S L+ GVL V LENV+ D T
Sbjct: 120 LLRTTTAEPTPEGVRWTVRKD-VTRYSALLRSPPGGVLSVMLENVVNDKYT 169
>12_02_1260 - 27395754-27397499
Length = 581
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 310 TPRGRPSPLWMLCTL*NAKVAPCTVSAVKEVSSTIFYFYFLSR 438
TP R SP W LCT+ + C + S+ I YF +++
Sbjct: 308 TPESRSSP-WRLCTVQQVEEVKCLARIIPVWSAGIVYFIVVTQ 349
>07_03_0162 - 14565165-14565350,14565757-14566131,14566287-14566922
Length = 398
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 182 GYPSFGSQRWSETYLRSYIRR---DPRRSQSVPRKRDPRRCHIHRTRQEE 322
GYP + +R YL++Y R +PR +QSV R + R R E+
Sbjct: 74 GYPEYPDRRQFVDYLQAYAARAGVEPRFNQSVTSARYDDAAGLWRVRAED 123
>03_02_0004 - 4869853-4871106
Length = 417
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/58 (36%), Positives = 23/58 (39%)
Frame = -2
Query: 266 HFENAAGLFVYKTGDTFHSTSASQTTDSRFRDALDVITQHLPVTFSAPLSKTFASFTA 93
HF GL+V T H T AS D L T+ P T SA L T S A
Sbjct: 180 HFVWNRGLYVQGYSPTIHPTDASDLASHATVDILTTATEASP-TASATLQWTHGSLNA 236
>01_01_0543 +
3985771-3985866,3985965-3986145,3986668-3986780,
3986854-3987190,3987602-3987603,3987661-3987743,
3988017-3988116,3988330-3988463,3988711-3988788,
3989333-3989387,3990159-3990239,3990369-3990567,
3990609-3990699,3990770-3990892,3991440-3991528,
3992450-3992539,3992619-3992792,3992911-3993035,
3993246-3993372,3993826-3993998
Length = 816
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +2
Query: 281 DPRRCHIHRTRQEEDR---HRYGCCVRSETPRS 370
D R H+H+ R E H+ CCV +TPRS
Sbjct: 2 DLLRSHLHKVRIPEPGSRIHKDECCVSFDTPRS 34
>01_01_0819 -
6387000-6387300,6387685-6387843,6387925-6388100,
6389293-6389476,6389565-6389875
Length = 376
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 361 RFRAYTTSIAVTVFLLACSVYVTASRITFSRNTLRTP 251
R RA + + VFL+AC+ A+ IT SR P
Sbjct: 2 RGRAAVFAAVLVVFLVACTAAAAAAAITISRKHQHRP 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,274,172
Number of Sequences: 37544
Number of extensions: 317442
Number of successful extensions: 960
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -