Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4d09
(672 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein. 161 6e-42
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 1.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.1
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 24 1.1
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 24 1.5
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 2.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 2.6
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 3.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 6.1
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 8.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 8.1
>X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein.
Length = 103
Score = 161 bits (391), Expect = 6e-42
Identities = 79/82 (96%), Positives = 79/82 (96%)
Frame = +3
Query: 147 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 326
VL DNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEH KRKT
Sbjct: 22 VLGDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHTKRKT 81
Query: 327 VTAMDVVYALKRQGRTLYGFGG 392
VTAMDVVYALK QGRTLYGFGG
Sbjct: 82 VTAMDVVYALKIQGRTLYGFGG 103
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 1.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 176 RDALDVITQHLPVTFSAPLSKTFASFTATGHLDELLGLCFVLVVAA 39
R AL V T T + + + +D LG CFV+V A+
Sbjct: 252 RVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFAS 297
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 1.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 176 RDALDVITQHLPVTFSAPLSKTFASFTATGHLDELLGLCFVLVVAA 39
R AL V T T + + + +D LG CFV+V A+
Sbjct: 252 RVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFAS 297
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 24.2 bits (50), Expect = 1.1
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -2
Query: 176 RDALDVITQHLPVTFSAPLSKTFASFTATGHLDELLGLCFVLVVAA 39
R AL V T T + + + +D LG CFV+V A+
Sbjct: 191 RVALGVTTVLTMTTLMSSTNAALPKISYVKSIDVYLGTCFVMVFAS 236
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 188 PSFGSQRWSETYLRSYIRRDPRRSQSVPRKRDPRRCHIHRTRQEED 325
PS + W+E +L + +R DP + ++ + + + H TRQ ED
Sbjct: 22 PSVMLKIWTEEFLSTILRLDP-KFIALHCQEVGGKNYEHSTRQVED 66
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 356 QSVHNIHSGDGLPLGVFGVCDSVADHV--FEEHFENAAGLFVYKTGDT 219
Q +H++H+ + + V DS +HV + + N G V GD+
Sbjct: 324 QMIHDLHTRISTAIDLGYVVDSYGNHVKLYTKQGLNVLGNIVQGNGDS 371
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 356 QSVHNIHSGDGLPLGVFGVCDSVADHV--FEEHFENAAGLFVYKTGDT 219
Q +H++H+ + + V DS +HV + + N G V GD+
Sbjct: 324 QMIHDLHTRISTAIDLGYVVDSYGNHVKLYTKQGLNVLGNIVQGNGDS 371
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 3.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 350 VHNIHSGDGLPLGVFG 303
VHN+H G+ G+FG
Sbjct: 331 VHNLHGMPGILGGIFG 346
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = -3
Query: 274 SRNTLRTPRVSSYIRPEIRFTPPLRAKR 191
+++ ++T ++ + PE++ TP +AKR
Sbjct: 387 NQDVVQTHVLTIHTIPEVKVTPRFQAKR 414
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 8.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 530 RRVLLACCHRCC 495
R V+++CC CC
Sbjct: 5 RHVVMSCCCWCC 16
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 16 SSRNALKSAATTNTKHKPRSSS 81
SS L +AAT++T PR +S
Sbjct: 825 SSPRYLSAAATSSTSTSPRPAS 846
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,613
Number of Sequences: 438
Number of extensions: 3335
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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