Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4d04
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 31 0.85
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 31 1.1
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 31 1.1
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 2.6
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 2.6
U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical pr... 29 2.6
EF584656-1|ABQ57414.1| 500|Caenorhabditis elegans LAD-2 short i... 29 2.6
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 29 2.6
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 29 2.6
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 29 2.6
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 29 2.6
AC024817-51|AAP68914.1| 496|Caenorhabditis elegans L1 cam adhes... 29 2.6
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 29 2.6
Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical p... 29 4.5
U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical pr... 29 4.5
U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z80215-10|CAB02271.3| 175|Caenorhabditis elegans Hypothetical p... 28 6.0
Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 28 7.9
U97592-4|AAB52872.1| 450|Caenorhabditis elegans Hypothetical pr... 28 7.9
U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical pr... 28 7.9
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 31.1 bits (67), Expect = 0.85
Identities = 25/84 (29%), Positives = 46/84 (54%)
Frame = +1
Query: 469 IKQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDL 648
++ + ++ ++L K +E L+A +AQ EEL ++Q E I DKQ +A+ +
Sbjct: 1703 LELENDELEELRAKGGGISSEEKRRLEAKIAQLEEELEEEQSNCELAI---DKQRKAQ-V 1758
Query: 649 QVTRVMTDLNRMYTGFQETMQRKR 720
Q+ ++ TDL+ T Q+T K+
Sbjct: 1759 QLEQITTDLSMERTLNQKTEAEKQ 1782
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 472 KQQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKD 624
+ QEE ++ ++K+ + N +AV +K ELFK+ ++R+ +KD
Sbjct: 363 EHQEEPDEDTMSKVKVLYIR--NIKEAVTEEKLNELFKEYASLDRVKKVKD 411
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -1
Query: 653 TCKSLASICLSLIAMMRSINSCFLKSSSVFCATTACSAFVCSVNVAISLVTNCL 492
TC+ L SIC+ + M S+ L S ++ A S S + I +V CL
Sbjct: 139 TCQLLVSICIDVTQFMISVVYLLLASKNIMNMIIAFSGTHISFCILILIVATCL 192
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 202 CKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 324
C D +V+ KY + +GARL S P+ + +GD + +
Sbjct: 396 CADPCQSYVEVKYLSQKTSTGARLCCSLPSVIRSEGDDVII 436
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 202 CKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 324
C D +V+ KY + +GARL S P+ + +GD + +
Sbjct: 396 CADPCQSYVEVKYLSQKTSTGARLCCSLPSVIRSEGDDVII 436
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Frame = +1
Query: 415 LLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEH--TNALQAVVAQKTE--ELF 582
L +E+ Q K + K QEE+NK+L L A ++ N L+A + Q E E
Sbjct: 994 LQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQT 1053
Query: 583 KKQEFIERIIAIKDKQIEAKDLQVTR-VMTDLNRMYTGFQETMQRK 717
++E R K+K+ +L++ + + +LN+ + + ++RK
Sbjct: 1054 MEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSDAENALRRK 1099
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Frame = +1
Query: 415 LLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEH--TNALQAVVAQKTE--ELF 582
L +E+ Q K + K QEE+NK+L L A ++ N L+A + Q E E
Sbjct: 994 LQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQT 1053
Query: 583 KKQEFIERIIAIKDKQIEAKDLQVTR-VMTDLNRMYTGFQETMQRK 717
++E R K+K+ +L++ + + +LN+ + + ++RK
Sbjct: 1054 MEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSDAENALRRK 1099
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Frame = +1
Query: 415 LLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFTEH--TNALQAVVAQKTE--ELF 582
L +E+ Q K + K QEE+NK+L L A ++ N L+A + Q E E
Sbjct: 994 LQDEMRQQDENISKLNKERKNQEEQNKKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQT 1053
Query: 583 KKQEFIERIIAIKDKQIEAKDLQVTR-VMTDLNRMYTGFQETMQRK 717
++E R K+K+ +L++ + + +LN+ + + ++RK
Sbjct: 1054 MEREKRNRADMDKNKRKAEGELKIAQETLEELNKSKSDAENALRRK 1099
>U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical
protein F07C4.6 protein.
Length = 204
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 155 TCGFPC-SSTYLSVNVSWPNLNCPILT*AI 69
TCG C +STY N +P LNC +T A+
Sbjct: 104 TCGLCCQTSTYSCQNAPFPRLNCASVTKAM 133
>EF584656-1|ABQ57414.1| 500|Caenorhabditis elegans LAD-2 short
isoform protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 228 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 118
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long
isoform protein.
Length = 1187
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 228 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 118
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 202 CKDAVSRHVDKKYKYTYSESGARLPPSAPNSVAKQGDPLYL 324
C D +V+ KY + +GARL S P+ + +GD + +
Sbjct: 396 CADPCQSYVEVKYLSQKTSTGARLCCSLPSVIRSEGDDVII 436
>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
domain-containingprotein Y54G2A.25 protein.
Length = 1187
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 228 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 118
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +1
Query: 508 KLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQVTRVMTDLNR 681
K +A++ L + + + K++ F+ERI+ + E D + R +T + R
Sbjct: 41 KKVASYETDLKKLSTEMQRLRRDAEKRETFLERIVTAQYHPTELNDTNLARTLTSIKR 98
>AC024817-51|AAP68914.1| 496|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform b protein.
Length = 496
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 228 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 118
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform a protein.
Length = 1187
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 228 HVSAYSVFTISIF*TAGDVLGHKLDLRVSLLEHVPQR 118
H Y F +IF TA L +K+ LR+ LEH P+R
Sbjct: 98 HQGYYQCFASNIFGTA---LSNKMHLRLGSLEHFPKR 131
>Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical
protein T06C12.14 protein.
Length = 245
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -1
Query: 152 CGFPC-SSTYLSVNVSWPNLNCPILT 78
CG C +S+Y NV++P LNC +T
Sbjct: 105 CGLCCQTSSYSCPNVAFPRLNCATIT 130
>U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical
protein F11D5.3b protein.
Length = 767
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 229 PRVCLQRLYNFHILNCW 179
PR+C +LYN IL CW
Sbjct: 722 PRMCPSKLYNEQILPCW 738
>U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical
protein F11D5.3a protein.
Length = 797
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 229 PRVCLQRLYNFHILNCW 179
PR+C +LYN IL CW
Sbjct: 752 PRMCPSKLYNEQILPCW 768
>U40059-5|AAA81140.1| 191|Caenorhabditis elegans Hypothetical
protein K03C7.3 protein.
Length = 191
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 581 KSSSVFCATTACSAFVCSVNVAISLVTNCLFFSSCCLIAGSYLPVHST 438
K +S C T S F C+ + L FS+CC I G + HST
Sbjct: 19 KDASFECVTLLKSVF-CARKKKKRFFLSFLSFSTCCSILGWFFLSHST 65
>Z80215-10|CAB02271.3| 175|Caenorhabditis elegans Hypothetical
protein C36B1.6 protein.
Length = 175
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Frame = -1
Query: 656 VTCKSLASICLSLIAMMR---SINSCFLKSSSVFCATTAC------SAFV-CSVNVAISL 507
+ C S+ S+ L++ M+ +I C L S+ F C ++F+ C+ +
Sbjct: 77 IDCCSIFSVLLNIARMVMFGGTILGCVLVIST-FSRNNECDQLLYWTSFIFCAFFIIFYS 135
Query: 506 VTNCLFFSSCCLI-AGSYLPV 447
+T C+F CC I G+Y V
Sbjct: 136 ITTCIFICCCCCIFTGAYRSV 156
>Z81124-5|CAB03374.1| 328|Caenorhabditis elegans Hypothetical
protein T21B4.7 protein.
Length = 328
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 587 FLKSSSVFCATTACSAFVCSVNVAISLVTNC--LFFSSCCL 471
FL+ S VF T ++ S I L T LFFSSCC+
Sbjct: 188 FLEPSVVFTPGTFWDTYLTSSFKLILLATGLQVLFFSSCCI 228
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 529 EHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQ 651
E +Q + +K E++ K E ++ ++ +DK+ + +DLQ
Sbjct: 260 EEIQKMQKALKEKDEQISKLTEQLQGLLINRDKETKVEDLQ 300
>U97592-4|AAB52872.1| 450|Caenorhabditis elegans Hypothetical
protein C14A11.5 protein.
Length = 450
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +1
Query: 193 YGNCKDAVSRHVDKKYKYTYSESGARLPPSAP-NSVAKQGDPLYLQPHTVLITKSGVIQL 369
YGNCK+++ V++KY + + L +S + + + + + + + K+ +++
Sbjct: 322 YGNCKESIRSRVEEKYNQLFIDRIRELTEKLEWSSESPEKNRQFTKTDELTVVKAHIVRK 381
Query: 370 I---MKSKLPYA---IELQEWLLEEVIPQV 441
+ KS P A E+ + L E+ P +
Sbjct: 382 LDYWKKSTQPQAAHYTEMYQLLFEKCGPSI 411
>U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical
protein F48E3.9 protein.
Length = 272
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +1
Query: 475 QQEEKNKQLVTKLIATFTEHTNALQAVVAQKTEELFKKQEFIERIIAIKDKQIEAKDLQV 654
++ + N LV +L A + ++ ++ K E + ++ E +E+ I +DK + ++
Sbjct: 168 KEAQNNSDLVLELKAALQQEKSSSHGML-NKIEIMRQRCEDLEKSILDRDKSEDENIMER 226
Query: 655 TRVMTDLNRMY 687
+RV +LN ++
Sbjct: 227 SRVEKELNALH 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,177,002
Number of Sequences: 27780
Number of extensions: 340580
Number of successful extensions: 1114
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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