Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4d01
(737 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07) 108 5e-24
SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16) 96 2e-20
SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26) 58 1e-08
SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) 52 5e-07
SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41) 41 0.001
SB_53973| Best HMM Match : TP2 (HMM E-Value=8.2) 37 0.020
SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092) 37 0.020
SB_40774| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_39460| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 33 0.24
SB_32251| Best HMM Match : MFS_1 (HMM E-Value=2.5e-19) 31 0.74
SB_7514| Best HMM Match : OATP (HMM E-Value=0) 31 0.97
SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073) 30 2.3
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 29 3.0
SB_52793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_20247| Best HMM Match : Keratin_B2 (HMM E-Value=0.1) 28 6.9
SB_17372| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_12845| Best HMM Match : Collagen (HMM E-Value=6.2) 28 9.1
>SB_37350| Best HMM Match : MFS_1 (HMM E-Value=4.9e-07)
Length = 349
Score = 108 bits (259), Expect = 5e-24
Identities = 56/145 (38%), Positives = 80/145 (55%), Gaps = 2/145 (1%)
Frame = +3
Query: 273 RHWVTFMLFLGMANAYIMRTNMSVAIVAMVNHT-ALTVIAEEIDT-ECGPVNPNKTSVVS 446
R+ + M F G Y MR N+SVA+VAMVN T A + + EC N T +
Sbjct: 34 RNVLVLMQFAGFVTVYGMRANLSVALVAMVNQTYANSASGTRVYVPECRLDGGNHTVDHT 93
Query: 447 TQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPV 626
+DG + WD QG +L +FFYGY++TQ+P G L+ +G + G+G+ ++F LL P+
Sbjct: 94 LEDGPFKWDQDTQGLVLGAFFYGYLVTQLPGGWLAGHYGGKSVFGLGVFFTAIFTLLTPI 153
Query: 627 AAEAGYGWLIVVRFIQGLGEGPIVP 701
AA L+ VR + G GE VP
Sbjct: 154 AARTHVALLVAVRLMAGFGEKVPVP 178
>SB_12290| Best HMM Match : MFS_1 (HMM E-Value=9.6e-16)
Length = 432
Score = 96.3 bits (229), Expect = 2e-20
Identities = 56/152 (36%), Positives = 77/152 (50%)
Frame = +3
Query: 261 GLGTRHWVTFMLFLGMANAYIMRTNMSVAIVAMVNHTALTVIAEEIDTECGPVNPNKTSV 440
G+ R+ + M +LG N Y MR N++VAIV MVN ++ K +
Sbjct: 110 GIPKRYVLLAMTWLGFINIYSMRVNLNVAIVGMVNDQTIS----------------KGRL 153
Query: 441 VSTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLV 620
+ ++ WDS+LQG +L SFFYGY + QIP L+ R G G G+ + S+ LL
Sbjct: 154 HFIKKAEFNWDSALQGLVLGSFFYGYWVLQIPGAWLAMRIGGTRVFGYGVFVTSLLALLT 213
Query: 621 PVAAEAGYGWLIVVRFIQGLGEGPIVPCTHAM 716
PVA L+ VR QGL G PC HA+
Sbjct: 214 PVATRYSVWGLVGVRIFQGLFLGVTFPCNHAI 245
>SB_24826| Best HMM Match : MFS_1 (HMM E-Value=1.1e-26)
Length = 473
Score = 57.6 bits (133), Expect = 1e-08
Identities = 41/136 (30%), Positives = 67/136 (49%)
Frame = +3
Query: 273 RHWVTFMLFLGMANAYIMRTNMSVAIVAMVNHTALTVIAEEIDTECGPVNPNKTSVVSTQ 452
R+ + ++F G Y +R N++VAI AMV + V + K SV+
Sbjct: 14 RYILACLIFWGFFTMYALRVNLNVAIGAMVKPHVVMVEGRAVI---------KVSVLV-- 62
Query: 453 DGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAA 632
+++G +L SF+YGYV Q+ G L+ + GA G +L+ S+ LL P+AA
Sbjct: 63 --------AVEGVVLGSFYYGYVALQLLGGWLAIKIGATRLYGAAILVASLLTLLTPLAA 114
Query: 633 EAGYGWLIVVRFIQGL 680
L+ +R ++GL
Sbjct: 115 RGSPYLLVALRMLEGL 130
>SB_51537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +3
Query: 492 ILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFI 671
+L SF+YGY + QIP G + G + G G+L+ SV L+ P + + I +R
Sbjct: 3 VLGSFYYGYAVLQIPAGWAVLKIGGKPIFGFGILVASVLALVTPPIVKQSFIVFICLRIA 62
Query: 672 QGLGEGPIVPCTHAM 716
QGL G I H +
Sbjct: 63 QGLSLGLIASAHHCI 77
>SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068)
Length = 256
Score = 52.0 bits (119), Expect = 5e-07
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Frame = +3
Query: 459 DYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAE- 635
D W+ G +LSSFF+GY+ITQIP G LS +GA L + S+ L++P+ A
Sbjct: 65 DMGWNKRESGLVLSSFFWGYLITQIPGGFLSDVYGAERLLLWAVTGCSLSTLVIPLVASQ 124
Query: 636 ---AGYGWLIVVRFIQGLGEGPIVPCTHAML 719
+ +++ R G+ +G P +++L
Sbjct: 125 KVTSPITLVLISRLALGVFQGIYYPSLYSLL 155
>SB_31394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 51.2 bits (117), Expect = 9e-07
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 492 ILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFI 671
IL SF+YGY++ QIP G L+ + G G G+ S L P+AA LI++R +
Sbjct: 3 ILGSFYYGYMVFQIPGGWLAMKLGGAKLFGFGIFSASFLTLFTPLAARCSPIALIILRVL 62
Query: 672 QGL 680
+GL
Sbjct: 63 EGL 65
>SB_16303| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +3
Query: 459 DYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEA 638
D AWD G ++S+FF+GY QI G LS ++G + LG +I S L VP
Sbjct: 53 DLAWDKEADGAVMSAFFWGYTPAQIVGGYLSDKYGGEVVLGYAAIIWSFCTLAVPFLPGK 112
Query: 639 GYGW------LIVVRFIQGLGEG 689
+ + +I+ R + GL +G
Sbjct: 113 AFLFFPPIVMVILSRVVTGLSQG 135
>SB_43984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 519 VITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLI 656
++TQ+P G+L++RFG R+ LG ML +S+F L PVAA L+
Sbjct: 1 MLTQVPGGMLAQRFGGRVVLGSCMLFSSIFVFLSPVAARTHVALLV 46
>SB_32467| Best HMM Match : MFS_1 (HMM E-Value=0.41)
Length = 366
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 273 RHWVTFMLFLGMANAYIMRTNMSVAIVAMV-NHTAL 377
R+ V + LG AN Y MR N+SVA+VAMV NHT L
Sbjct: 53 RYLVAVLALLGFANVYGMRVNLSVALVAMVSNHTRL 88
>SB_53973| Best HMM Match : TP2 (HMM E-Value=8.2)
Length = 185
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 225 GLEDQRSPRYTGGLGTRHWVTFMLFLGMANAYIMRTNMSVAIVAMVN-HT 371
G D + + G R+ V M+FLG+ Y +R N+SVAI AM N HT
Sbjct: 19 GEGDGKDRKKHPGFPKRYIVAIMVFLGICVQYALRVNLSVAIGAMCNPHT 68
>SB_36205| Best HMM Match : ADH_zinc_N (HMM E-Value=0.00092)
Length = 676
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 273 RHWVTFMLFLGMANAYIMRTNMSVAIVAMVNHTALTV 383
R+ + M FLG N Y +R N++VA+ AMVN+ + V
Sbjct: 326 RYVLAIMTFLGFMNMYALRVNLNVALGAMVNNHTVNV 362
>SB_40774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 225 GLEDQRSPRYTGGLGTRHWVTFMLFLGMANAYIMRTNMSVAIVAMVN-HT 371
G D + + G R+ V M+FLG+ Y +R N+SVAI AM N HT
Sbjct: 19 GEGDGKDRKKHPGFPKRYIVAIMVFLGICVQYALRVNLSVAIGAMCNPHT 68
>SB_39460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 225 GLEDQRSPRYTGGLGTRHWVTFMLFLGMANAYIMRTNMSVAIVAMVN-HT 371
G D + + G R+ V M+FLG+ Y +R N+SVAI AM N HT
Sbjct: 19 GEGDGKDRKKHPGFPKRYIVAIMVFLGICVQYALRVNLSVAIGAMCNPHT 68
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 33.1 bits (72), Expect = 0.24
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +3
Query: 432 TSVVSTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFG 611
TS+V+ D + SSL S F G++ I FGILS ++G R L I+S
Sbjct: 77 TSIVTEWDLVCEY-SSLSWATNSIMFTGWLFGNIVFGILSDKYGRRKVL----FISSCMV 131
Query: 612 LLVPVAAE-AGYGWLIVV-RFIQGLGEG 689
V A+ Y WL V RF G G G
Sbjct: 132 CWVAFASSFVPYYWLYAVFRFFIGFGLG 159
>SB_32251| Best HMM Match : MFS_1 (HMM E-Value=2.5e-19)
Length = 509
Score = 31.5 bits (68), Expect = 0.74
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +3
Query: 471 DSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAG-YG 647
D L G++ S+ G +S G + + + +L+N LL + G
Sbjct: 40 DFKLYGFVFGSYALSQAFMSPLLGYISDARGLKFAIILAILLNGAGNLLYAFSYAVGSVN 99
Query: 648 WLIVVRFIQGLGEGPI 695
++ RF+ GLG G I
Sbjct: 100 MVLAGRFVAGLGAGAI 115
>SB_7514| Best HMM Match : OATP (HMM E-Value=0)
Length = 763
Score = 31.1 bits (67), Expect = 0.97
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 441 VSTQDGDYAWDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLV 620
+ST + Y + SSL G++ SSF ++ L R ++ GVG+L + G+L+
Sbjct: 56 ISTIEKRYGYSSSLTGFLTSSFDIAALVLTPLVSFLGARRKKPVWCGVGLLTMGI-GMLI 114
>SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)
Length = 582
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 459 DYAWDSSLQGYILSSF-FYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAE 635
D D S ++ +S F+G+ I I GI++ ++G L ++ V GL + +A
Sbjct: 399 DLVCDHSFTAWMANSMLFFGWAIGAIFLGIIADKYGRCSVLFPSAIL--VMGLSLAMAFV 456
Query: 636 AGYGWLIVVRFIQGLGEG 689
++V+RF G EG
Sbjct: 457 KKAWLVLVLRFFIGFFEG 474
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +2
Query: 314 RLHHEDEHVGRHRCYGQPHSSYCHR*RDRH*MRPSQS*QNQRGLNPRRRLRVGLFIARLY 493
R HH H H + H + HR R RH + R + + + I R +
Sbjct: 308 RYHHHHHHRHHHHHHHHHHQRHRHRHRHRHRHHHHHHHEYNRRHRYFTDINITIQIIRHH 367
Query: 494 FIVVFLRL 517
FI++ + +
Sbjct: 368 FIIIIINI 375
>SB_52793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +3
Query: 501 SFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYGWLIVVRFIQGL 680
+F Y + I G+ + F + L +L+ S G+ + Y L+V RFI G+
Sbjct: 117 AFIVIYTFSGIILGLFTGTFNRKNILVFCLLLWS--GMTLLTGFSTTYWHLLVTRFILGI 174
Query: 681 GEGPIVPCTHAML 719
GE P +++
Sbjct: 175 GEAGCTPFATSLI 187
>SB_20247| Best HMM Match : Keratin_B2 (HMM E-Value=0.1)
Length = 356
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 694 MGPSPSPCMNLTTMSHPYPASAATGTSRPN 605
+GP P +N T + P P SA T T+RPN
Sbjct: 172 IGPMPKSTVNAT--ARPNPHSAFTTTARPN 199
>SB_17372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 661 TTMSHPYPASAATGTSRPNTEFISIPTP 578
TTMS P SA+ TSRP+T P P
Sbjct: 120 TTMSPPVSPSASVSTSRPSTLSPVTPPP 147
>SB_12845| Best HMM Match : Collagen (HMM E-Value=6.2)
Length = 183
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +3
Query: 468 WDSSLQGYILSSFFYGYVITQIPFGILSKRFGARLFLGVGMLINSVFGLLVPVAAEAGYG 647
W +SL+G + + + FG L+ + F G+ ++ FG L A+ G+G
Sbjct: 52 WGASLRGKYKGLWGLAFAASTKGFGGLAFAASTKGFGGLAFAASTGFGGLAFAASTKGFG 111
Query: 648 WLIVVRFIQGLG 683
L +G G
Sbjct: 112 GLAFAASTKGFG 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,192,201
Number of Sequences: 59808
Number of extensions: 593357
Number of successful extensions: 1910
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1899
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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