Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4c24
         (217 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   2.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   2.2  
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    22   3.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   5.2  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 34  KPLKPXTLHDGNIKKSVYENIXYVRKLXXKENMPGEH 144
           +PL   TL DGN +  +Y    Y  K   K +   EH
Sbjct: 527 RPLNQWTLEDGNGESFIYGT--YGDKQAVKMDSGSEH 561


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 34  KPLKPXTLHDGNIKKSVYENIXYVRKLXXKENMPGEH 144
           +PL   TL DGN +  +Y    Y  K   K +   EH
Sbjct: 528 RPLNQWTLEDGNGESFIYGT--YGDKQAVKMDSGSEH 562


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 22  NDNRKPLKPXTLHDGNIKKSVYENIXY 102
           ND R PL+   +H     KSV E + Y
Sbjct: 145 NDIRYPLEMHIIHRNKKYKSVGEALGY 171


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 169 NRDCKTCDRARQAYFL 122
           NRD   C+R ++ +F+
Sbjct: 373 NRDGPNCERCKENFFM 388


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.138    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,436
Number of Sequences: 2352
Number of extensions: 1642
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 49
effective length of database: 448,731
effective search space used:  9872082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)