Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4c21
(446 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0022 - 170045-170095,170406-170554,170764-170875,171398-17... 111 3e-25
05_01_0020 + 143273-143592,144278-144371,144466-144537,144675-14... 99 1e-21
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 48 3e-06
06_03_0717 + 23834965-23835051,23836760-23836859,23837685-238377... 46 1e-05
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 39 0.002
04_04_0063 - 22441549-22442961 32 0.18
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 27 0.43
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 31 0.56
08_02_1027 + 23749400-23750698 30 0.74
02_01_0301 + 2011707-2015423,2016982-2017182,2017670-2017786,201... 30 0.74
10_08_0187 + 15592130-15592512,15592597-15592972 30 0.97
03_02_1027 + 13422698-13422914,13424899-13424959,13425366-134254... 30 0.97
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968... 29 1.3
08_01_1083 + 11096520-11096664,11097543-11097592,11097682-110977... 29 1.3
06_01_1009 - 7859357-7859405,7860476-7860660,7860747-7860821,786... 29 1.3
10_01_0132 - 1601421-1601657,1601761-1601922,1602812-1603721,160... 29 1.7
06_03_1368 - 29612463-29612638,29613135-29613222,29613334-296134... 28 3.0
06_01_0784 - 5868545-5868888,5868990-5869085,5870313-5870394,587... 28 3.0
06_01_1077 - 8796951-8797097,8797185-8797442,8797541-8797812,879... 28 3.9
01_02_0129 + 11410345-11410487,11410908-11411014,11414512-114147... 28 3.9
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 27 5.2
08_02_0185 + 13959652-13959718,13961374-13961648,13961866-139619... 27 5.2
03_05_0035 + 20075691-20075695,20075720-20076326 27 5.2
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 27 6.9
05_04_0348 + 20485884-20485995,20486818-20486951,20487668-20487760 27 6.9
02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599 27 9.1
02_01_0590 + 4376785-4377009,4378153-4378407,4378514-4378641,437... 27 9.1
>01_01_0022 -
170045-170095,170406-170554,170764-170875,171398-171469,
171578-171671,171770-171921,172004-172072
Length = 232
Score = 111 bits (266), Expect = 3e-25
Identities = 46/110 (41%), Positives = 79/110 (71%)
Frame = +1
Query: 94 MNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNS 273
M ++FG K K+P PSI D + ++ R ++++ K++KLD EL +YK+Q+ K R GP++++
Sbjct: 1 MKKIFGAKKSKDPPPSIQDATERINKRGESVDDKIKKLDEELGRYKEQIRKTRPGPSQDA 60
Query: 274 VKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMK 423
+K +A+R+LK K+MYE+Q + L Q++N++Q +A LKD T++AMK
Sbjct: 61 IKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVAFAADGLKDAQQTMNAMK 110
>05_01_0020 +
143273-143592,144278-144371,144466-144537,144675-144786,
145179-145327,145484-145510,145931-145981
Length = 274
Score = 99.1 bits (236), Expect = 1e-21
Identities = 42/87 (48%), Positives = 65/87 (74%)
Frame = +1
Query: 163 VDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLR 342
+ R D+++ K++KLD EL +YKDQ+ K R GPA+ ++K +AMRVLKQ++MYE Q D L
Sbjct: 57 ISKRGDSVDDKIKKLDAELARYKDQIKKTRPGPAQEAIKARAMRVLKQRRMYEGQRDMLY 116
Query: 343 AQSFNMEQANYATQTLKDTHTTISAMK 423
Q++N++Q +A++ LKD T++AMK
Sbjct: 117 NQTYNLDQVAFASEGLKDAQQTMTAMK 143
>09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 48.0 bits (109), Expect = 3e-06
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Frame = +1
Query: 97 NRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMRE-GPAKNS 273
NRLFG+ K ++ S + ++ D +E+K + L+ +K ++ + +E AKN
Sbjct: 767 NRLFGKPK-EQANASALATLDKLNETLDMLEKKEKVLE---KKAAAELERAKEFSKAKN- 821
Query: 274 VKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQKK 444
K+ A++ LK+KK+YEQQ++ L + + K T T+ A++ G K
Sbjct: 822 -KRAAIQSLKRKKLYEQQIEQLGNFQLRIHDQMIMLEAAKATTETVDALRTGAAAMK 877
>06_03_0717 +
23834965-23835051,23836760-23836859,23837685-23837770,
23837867-23837958,23838659-23838773,23838847-23839029
Length = 220
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 94 MNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMRE-GPAKN 270
M+ +FG+ K S + ++D ++ +E +K + ++K ++ K + AKN
Sbjct: 1 MSGVFGKVFGKSKAQSQATALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKN 60
Query: 271 SVKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQKK 444
K+ A++ LK+K++YEQQ++ L + + K T T+ A++ G + K
Sbjct: 61 --KRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMK 116
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 187 EQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQK-KMYEQQLDSLRAQSFNME 363
+QK+ +L+TE RK K ++ + R A +Q +R L+++ + EQQ++ + M+
Sbjct: 113 DQKLSELETENRKMKLELEEYRAEAAHLKNQQATIRRLEERNRQLEQQMEEKVREMVEMK 172
Query: 364 QANYATQTLKDTHTTISAMKD 426
Q + A +D+ T+ A+KD
Sbjct: 173 QRSLA----EDSQKTLEALKD 189
>04_04_0063 - 22441549-22442961
Length = 470
Score = 32.3 bits (70), Expect = 0.18
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +1
Query: 184 IEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQSFNME 363
+ QKV +++ ELRK KD K++ + +++ R + + +Y Q L ++E
Sbjct: 1 MRQKVSEMEEELRKEKDAAEKVQLLQREVEKAKESERKMLESLIY--QTKQLEQTKISLE 58
Query: 364 QANYATQTLKDTHTTISA 417
+A TL+ + ++ A
Sbjct: 59 EAKLEITTLQQANASLEA 76
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 27.1 bits (57), Expect(2) = 0.43
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = +1
Query: 187 EQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQ 366
E ++ EL KYKDQ++ A+ + Q + K KK E + L A + + E
Sbjct: 129 ETELHLAQKELNKYKDQLNN-----AETTRVQALSELEKAKKTVEDLTNKLDAINKSKEL 183
Query: 367 ANYATQTLK 393
A AT+ K
Sbjct: 184 AIQATEDAK 192
Score = 22.6 bits (46), Expect(2) = 0.43
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 121 PKEPGPSITDCIKNVDGRADNIEQKV 198
PK+ + D + NVDG NI +++
Sbjct: 63 PKQGTGTTQDDVPNVDGSHPNIRRRI 88
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 30.7 bits (66), Expect = 0.56
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +1
Query: 118 KPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRV 297
+PK P S+ D + + +NI V + +K K + K ++ KN K+K +
Sbjct: 39 EPKTPYHSMIDEDDVENYQQENIWNPVVMKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKK 98
Query: 298 LKQKKMYEQQLDSLRAQ 348
K+KK +++ S +AQ
Sbjct: 99 KKKKKKKKKRWPSNKAQ 115
>08_02_1027 + 23749400-23750698
Length = 432
Score = 30.3 bits (65), Expect = 0.74
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 79 RFKPNMNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMRE 255
+ K + L +K KE G + DCIK +G +++ KL R +D+ S++RE
Sbjct: 246 QLKFESDELAAASKEKERG--LVDCIKMFEGDLIKAKEENNKLIESQRVIRDENSRLRE 302
>02_01_0301 + 2011707-2015423,2016982-2017182,2017670-2017786,
2018030-2018122
Length = 1375
Score = 30.3 bits (65), Expect = 0.74
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 238 MSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISA 417
+SK E N ++KA++ L E + LR +EQ Q L+ +TISA
Sbjct: 858 ISKEEEEHGVNPAREKALQPLTSSTELETLTEILRLDGSELEQFQACFQELQYPVSTISA 917
Query: 418 MKDGVTQ 438
+ V Q
Sbjct: 918 RRRDVAQ 924
>10_08_0187 + 15592130-15592512,15592597-15592972
Length = 252
Score = 29.9 bits (64), Expect = 0.97
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 341 RRLSSCCSYIFFCFNTLIAFCL 276
RRL + C + FCF L+ FCL
Sbjct: 32 RRLCALCPFDTFCFRPLLGFCL 53
>03_02_1027 +
13422698-13422914,13424899-13424959,13425366-13425464,
13428959-13429361
Length = 259
Score = 29.9 bits (64), Expect = 0.97
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 100 RLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSV 276
RLF + +E G + DC+ A + KV +L+TEL +D + KM+E A N V
Sbjct: 189 RLFEKTS-REVGAQM-DCLT---AHATASDGKVAQLETELEVARDDLQKMKEIVASNDV 242
>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
14397510-14397609
Length = 2033
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/78 (21%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 139 SITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKM- 315
S+T +K ++ + ++E K L E+ DQ+ ++++ + +A Q ++
Sbjct: 1045 SVTVVMKALESKHADLEDKSSSLSREMNLAYDQVRELQDQLRVKDEEYEAFVKSHQTQVN 1104
Query: 316 -YEQQLDSLRAQSFNMEQ 366
+E+Q+ SL+ +S+ M +
Sbjct: 1105 DFEEQISSLQKKSYYMNE 1122
>08_01_1083 +
11096520-11096664,11097543-11097592,11097682-11097754,
11099122-11099201,11099354-11099505,11100653-11100812,
11100886-11100933,11101118-11101198,11101517-11101597
Length = 289
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +1
Query: 187 EQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQ---LDSLRAQSFN 357
EQ ++K L K D + NS+KQK + Q + Y++ +++ Q N
Sbjct: 125 EQDLEKASDYLEKSADLFDSEGQSSQSNSIKQKVAEIAAQLEQYQKANEIFEAIARQQIN 184
Query: 358 MEQANYATQ 384
Y+ +
Sbjct: 185 NNLLKYSVR 193
>06_01_1009 -
7859357-7859405,7860476-7860660,7860747-7860821,
7860852-7861313,7861411-7861482,7861629-7861775,
7861888-7862043,7862136-7862306,7862505-7862675,
7862763-7862828,7864302-7864387,7864505-7864667
Length = 600
Score = 29.5 bits (63), Expect = 1.3
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +1
Query: 157 KNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDS 336
+++ + D IE +K+DT + + + KMR A + AMRV K++++ ++L S
Sbjct: 513 QSLKDKDDAIEMLAKKVDTLTKAMEVEAKKMRREVAAMEKEVAAMRVDKEQEVKARRLGS 572
>10_01_0132 - 1601421-1601657,1601761-1601922,1602812-1603721,
1604587-1604651,1604704-1604746,1605086-1605128,
1605874-1605955,1606270-1606464,1606567-1606721,
1611207-1611435,1611538-1611693,1612539-1613476,
1614946-1614967
Length = 1078
Score = 29.1 bits (62), Expect = 1.7
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = -3
Query: 393 LQCLRCIICLFHVERLGTETIKLLFIHFLLFQYSHCFLLD*IFSRTLPHFAHLILVFSKF 214
L+CL C H + ++T+K+L I+ F + + D S P L L K
Sbjct: 838 LECLFLRDCHIHDHHISSQTLKILTINISDFSFVDKY--DCCIS--TPSVTALTLFGPKG 893
Query: 213 CVQFLDFLFNIIGSAIYVFNAIRNAG 136
V L + +++ +++Y+ N N G
Sbjct: 894 RVPLLQDMASLVSASVYLANDFSNFG 919
>06_03_1368 -
29612463-29612638,29613135-29613222,29613334-29613474,
29613561-29613595,29613990-29614054,29614286-29614335,
29614417-29614521,29614608-29614688,29614771-29614852,
29614941-29614995,29615111-29616164,29617202-29617289,
29617379-29617485,29617568-29617686,29617784-29617994
Length = 818
Score = 28.3 bits (60), Expect = 3.0
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +1
Query: 130 PGPSITDCIK-NVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQ 306
P PS++ I + + D +E +++ D E + ++ + + N+V Q
Sbjct: 229 PSPSVSRGISFDENTLTDPVELHIRRGDREEEEELRRVLSLSKAENANAVDGSGSFDTSQ 288
Query: 307 KKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMKDG 429
++ +SF +E T K+ H A+ DG
Sbjct: 289 SHSSSNMEETAHTESFQLEAVEAMDSTNKEEHGNSHALSDG 329
>06_01_0784 -
5868545-5868888,5868990-5869085,5870313-5870394,
5870639-5870839,5871810-5871818
Length = 243
Score = 28.3 bits (60), Expect = 3.0
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 10/49 (20%)
Frame = +1
Query: 220 RKYKDQMSK-----MREGPAKNSVKQKAMRVLKQ-----KKMYEQQLDS 336
+++KD ++K +EG AK +Q+A R LKQ KK Y++ L++
Sbjct: 34 KRHKDNVTKRLATMQKEGAAKEKEQQQAARALKQIEAKAKKSYQKDLEN 82
>06_01_1077 -
8796951-8797097,8797185-8797442,8797541-8797812,
8797907-8797967,8798082-8798159,8798380-8798439,
8798543-8798629,8798717-8798941,8799003-8799091,
8799137-8799251
Length = 463
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +1
Query: 166 DGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRA 345
DG D EQ+ + + K + KM+ A+N ++ A + +KK Y QQL+S R+
Sbjct: 147 DGGDDAGEQRGAD-SSAVSKERRGDQKMQRRLAQN--REAARKSRMRKKAYIQQLESSRS 203
Query: 346 QSFNMEQ 366
+ ++EQ
Sbjct: 204 KLMHLEQ 210
>01_02_0129 +
11410345-11410487,11410908-11411014,11414512-11414786,
11415014-11415179,11415681-11415922,11417046-11417141,
11417574-11417761,11418573-11418789
Length = 477
Score = 27.9 bits (59), Expect = 3.9
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +1
Query: 184 IEQKVQKLDTELRKYKDQMSKMREGP 261
+ +KV+K+D E+ K+ + +++RE P
Sbjct: 169 LARKVKKIDNEIEKHMELFTQLRENP 194
>08_02_0499 - 17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 27.5 bits (58), Expect = 5.2
Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 187 EQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMY--EQQLDSLRAQSFNM 360
+ K QKL++++ D S++ + +Q+ M +++Q++MY +QQL Q +
Sbjct: 1023 QNKPQKLESQM----DHQSELVQQQQVYFQQQQQMYLMQQQQMYQQQQQLQQQLLQQQLL 1078
Query: 361 EQANYATQ 384
+Q Y +Q
Sbjct: 1079 QQQQYLSQ 1086
>08_02_0185 +
13959652-13959718,13961374-13961648,13961866-13961972,
13962932-13962974,13964633-13964824
Length = 227
Score = 27.5 bits (58), Expect = 5.2
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +1
Query: 184 IEQKVQKLDTELRKYKDQMSKMREGP 261
+ +KV+K+D E+ K+ + +++RE P
Sbjct: 108 LARKVKKIDDEIEKHMELFTQLRENP 133
>03_05_0035 + 20075691-20075695,20075720-20076326
Length = 203
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 124 KEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYK 231
KEPG I DC DG ++K +K D + K+K
Sbjct: 24 KEPGQFIADCPYLKDGSHIKEDKKGEKKDEKKEKHK 59
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 163 VDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQL 330
+D RA++ E K Q L +KY +S +R+ +K K K + +QK ++ +L
Sbjct: 433 IDPRAEDKELKFQLL----KKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWEL 484
>05_04_0348 + 20485884-20485995,20486818-20486951,20487668-20487760
Length = 112
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 88 PNMNRLFGRAKPKEPGPSITDCIKNV 165
PN+N LFGR PG S + KN+
Sbjct: 39 PNLNGLFGRQSGTTPGYSYSTANKNM 64
>02_05_0026 + 25168944-25168991,25169114-25169179,25169414-25169599
Length = 99
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 244 KMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMK 423
K R+ +KNS K+KA+ KKM ++L+ + F E + ++ T T SAM+
Sbjct: 31 KKRQKRSKNSEKEKAVAPSSSKKMDREELEK-TIRGFLKELDSTEAAPMRTTGCT-SAMR 88
>02_01_0590 +
4376785-4377009,4378153-4378407,4378514-4378641,
4378738-4378779,4378875-4378956,4379035-4379103,
4379180-4379350,4379430-4379495,4379777-4379845,
4379928-4380056,4380845-4380881,4380906-4380997,
4381541-4381602,4381855-4381918
Length = 496
Score = 26.6 bits (56), Expect = 9.1
Identities = 19/100 (19%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +1
Query: 76 KRFKPNMNRLFGRAKPKEPG--PSITDCIKNVDGRADNIEQKVQK-LDTELRKYKDQMSK 246
K+F + ++ K+P P+ ++ + E V K + +L D+M
Sbjct: 263 KKFSKSFKQMIATCLMKDPSKRPTAQHLLELPFFKKVKFEDNVLKSVLNKLPSLGDRMQS 322
Query: 247 MREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQ 366
++E AK ++K + K+K ++ + + +F++E+
Sbjct: 323 IQENEAKLQAEKKPLDKCKEKASQDEYMRGVSEWNFDIEE 362
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,572,029
Number of Sequences: 37544
Number of extensions: 213893
Number of successful extensions: 638
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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