Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4c21
(446 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016448-6|AAB65951.1| 217|Caenorhabditis elegans Hypothetical ... 143 5e-35
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 34 0.041
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 34 0.041
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 34 0.041
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 33 0.13
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 33 0.13
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 33 0.13
Z81484-5|CAB03972.2| 293|Caenorhabditis elegans Hypothetical pr... 32 0.17
U41528-2|AAK39168.1| 125|Caenorhabditis elegans Hypothetical pr... 32 0.22
U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical pr... 31 0.38
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 31 0.38
Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical p... 31 0.50
AF022974-8|AAX22288.1| 289|Caenorhabditis elegans Serpentine re... 31 0.50
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 29 2.0
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 29 2.0
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 2.0
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 29 2.0
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 28 2.7
U88172-10|AAM97988.1| 437|Caenorhabditis elegans Hypothetical p... 28 2.7
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 28 2.7
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 28 3.6
Z92777-2|CAB07167.1| 387|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z54342-13|CAH60747.1| 123|Caenorhabditis elegans Hypothetical p... 27 4.7
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 27 4.7
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 27 4.7
AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical ... 27 4.7
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 27 6.2
Z82278-2|CAB05254.1| 170|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 27 8.2
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 27 8.2
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 27 8.2
>AF016448-6|AAB65951.1| 217|Caenorhabditis elegans Hypothetical
protein F41E6.9 protein.
Length = 217
Score = 143 bits (347), Expect = 5e-35
Identities = 65/113 (57%), Positives = 88/113 (77%)
Frame = +1
Query: 94 MNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNS 273
MNR+FG K K P P + + I NV+ R+D+I++K+QKLD +L K +DQMSKMREGP+KN
Sbjct: 1 MNRIFGTGK-KVPPPDLNNAISNVESRSDSIDKKIQKLDQDLMKLRDQMSKMREGPSKNL 59
Query: 274 VKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMKDGV 432
+KQKA+RVLKQK+MYE Q L Q+FNM+Q+N+A Q +KD T++AMKDG+
Sbjct: 60 IKQKALRVLKQKRMYENQKGQLDQQAFNMDQSNFAIQGMKDNQVTVAAMKDGL 112
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 34.3 bits (75), Expect = 0.041
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 154 IKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD 333
++ V R + EQK +K D+E RK + + + E ++ ++L +K E +L
Sbjct: 934 LEEVSKRLEIEEQKAKKADSESRKLTEMVRHLEEN--LEDEERSRQKLLLEKNSIESRLK 991
Query: 334 SLRAQSFNMEQA 369
L AQ +E +
Sbjct: 992 ELEAQGLELEDS 1003
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 34.3 bits (75), Expect = 0.041
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 154 IKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD 333
++ V R + EQK +K D+E RK + + + E ++ ++L +K E +L
Sbjct: 934 LEEVSKRLEIEEQKAKKADSESRKLTEMVRHLEEN--LEDEERSRQKLLLEKNSIESRLK 991
Query: 334 SLRAQSFNMEQA 369
L AQ +E +
Sbjct: 992 ELEAQGLELEDS 1003
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 34.3 bits (75), Expect = 0.041
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = +1
Query: 154 IKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD 333
++ V R + EQK +K D+E RK + + + E ++ ++L +K E +L
Sbjct: 934 LEEVSKRLEIEEQKAKKADSESRKLTEMVRHLEEN--LEDEERSRQKLLLEKNSIESRLK 991
Query: 334 SLRAQSFNMEQA 369
L AQ +E +
Sbjct: 992 ELEAQGLELEDS 1003
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.13
Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 112 RAKPKEPGPSITDCIKNVDGR-ADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKA 288
R K ++ ++ I+ VDG A ++E+K K + ++ +D+M+ E K + ++K
Sbjct: 947 RRKAQQEVENLKKSIEAVDGNLAKSLEEKAAK-ENQIHSLQDEMNSQDETIGKINKEKKL 1005
Query: 289 MRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQKK 444
+ ++ Q +D L+A+ QAN L+ T+ M++ V ++K
Sbjct: 1006 L-----EENNRQLVDDLQAEEAKQAQANRLRGKLEQ---TLDEMEEAVEREK 1049
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.13
Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 112 RAKPKEPGPSITDCIKNVDGR-ADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKA 288
R K ++ ++ I+ VDG A ++E+K K + ++ +D+M+ E K + ++K
Sbjct: 947 RRKAQQEVENLKKSIEAVDGNLAKSLEEKAAK-ENQIHSLQDEMNSQDETIGKINKEKKL 1005
Query: 289 MRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQKK 444
+ ++ Q +D L+A+ QAN L+ T+ M++ V ++K
Sbjct: 1006 L-----EENNRQLVDDLQAEEAKQAQANRLRGKLEQ---TLDEMEEAVEREK 1049
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.13
Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 112 RAKPKEPGPSITDCIKNVDGR-ADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKA 288
R K ++ ++ I+ VDG A ++E+K K + ++ +D+M+ E K + ++K
Sbjct: 947 RRKAQQEVENLKKSIEAVDGNLAKSLEEKAAK-ENQIHSLQDEMNSQDETIGKINKEKKL 1005
Query: 289 MRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQKK 444
+ ++ Q +D L+A+ QAN L+ T+ M++ V ++K
Sbjct: 1006 L-----EENNRQLVDDLQAEEAKQAQANRLRGKLEQ---TLDEMEEAVEREK 1049
>Z81484-5|CAB03972.2| 293|Caenorhabditis elegans Hypothetical
protein C47A10.8 protein.
Length = 293
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -3
Query: 309 LLFQYSHCFLLD*IFSRTLPHFAHLILVFSKFCVQFLDF----LFNIIGSAIYV 160
+ QYSH + + + H +HL+ ++FC F F LF+ IG+ I +
Sbjct: 71 IFIQYSHILGASAMAAYEISHLSHLLTALNRFCAVFFPFYYEKLFSKIGTIIMI 124
>U41528-2|AAK39168.1| 125|Caenorhabditis elegans Hypothetical
protein C15C7.5 protein.
Length = 125
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 166 DGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKK 312
+G ++++KLDT+L D MSKM E + + M LKQ+K
Sbjct: 36 EGEVTEETEEIRKLDTQLDHLNDYMSKMEE--RLKAHNDRMMETLKQQK 82
>U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical
protein ZK742.2 protein.
Length = 594
Score = 31.1 bits (67), Expect = 0.38
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +1
Query: 100 RLFGRAKPKEPGPSITDCIKNVDGRADNI--EQKVQKLDTELRKYKDQMSKMREGPAKNS 273
R+ PK D +VD D+I Q +KL+ ++ K KD+ K+ E P K+
Sbjct: 333 RIINPRPPKNKRKKSDDDFIDVDISIDDILMVQYAEKLEVDV-KSKDESEKITESPEKHK 391
Query: 274 VKQKAMRVLKQK 309
++ K + +K K
Sbjct: 392 IEMKNEKPVKIK 403
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 31.1 bits (67), Expect = 0.38
Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 5/144 (3%)
Frame = +1
Query: 7 SEKQVKFAN*LG*VLKNFFTEFYKRFKPNMNRLFGRA-KPKEPGPSITDCIKNVDGRADN 183
SEK++K N +N +E + + R A KPK+ P + + + ++ +
Sbjct: 172 SEKKLKETNGKVTKSRNQLSERVSELEAQLKREADTAQKPKQADPDLLNKVGRLNDLLTS 231
Query: 184 IEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRV---LKQKKMYEQQLDSLRAQSF 354
+Q + L E+ K+K ++ + + V ++ + L+Q K + L++ S
Sbjct: 232 EKQNTRVLQEEVAKFKAELESTNKTMKQKLVHERKTLIKEKLEQGKEITRLLEANAHLSI 291
Query: 355 -NMEQANYATQTLKDTHTTISAMK 423
N EQ N L T+ S K
Sbjct: 292 QNEEQKNLIQNLLDQQQTSTSNAK 315
>Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical
protein C08H9.3a protein.
Length = 758
Score = 30.7 bits (66), Expect = 0.50
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 270 IFSRTLPHFAHLILVFSKFCVQFLDFLFNIIGSAIYVFNAIR 145
+ S+T P F+ IL+F +F V F D L+ I A+Y F + R
Sbjct: 85 VISKT-PRFSRRILIFQRFSVIFCDILY-IAVCALYSFRSPR 124
>AF022974-8|AAX22288.1| 289|Caenorhabditis elegans Serpentine
receptor, class sx protein10 protein.
Length = 289
Score = 30.7 bits (66), Expect = 0.50
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = -3
Query: 399 SVLQCLRC---IICLFHVERLGTETIKLLFIHFLLFQYSHCFLLD*IFSRTLPHFAHLIL 229
SVLQC +C I CLF G + F + F IFS+T LI+
Sbjct: 44 SVLQCFQCAFHIFCLFGSIFEGALNFMNPMNRYKCFWFISYF----IFSQTAQDIIMLII 99
Query: 228 VFSKFCVQFLDFLFNIIGSAIYVF 157
V C FL+ I Y+F
Sbjct: 100 VLDILCFVQFPFLYMRISKIKYIF 123
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 172 RADNIEQKVQKLDTELRKYKDQMSKMREGPAK-----NSVKQKAMRVLKQKKMYEQQLDS 336
+ + ++ ++ L T+ K Q + A+ S KQKA R +QKK + LDS
Sbjct: 119 QTEKLKDQISTLQTDFEKVSAQRKAQEQMNAELVDEVASFKQKAERAEEQKKKLVEDLDS 178
Query: 337 LRAQSFNMEQAN 372
L + ++AN
Sbjct: 179 LDDKLAAEKRAN 190
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 172 RADNIEQKVQKLDTELRKYKDQMSKMREGPAK-----NSVKQKAMRVLKQKKMYEQQLDS 336
+ + ++ ++ L T+ K Q + A+ S KQKA R +QKK + LDS
Sbjct: 964 QTEKLKDQISTLQTDFEKVSAQRKAQEQMNAELVDEVASFKQKAERAEEQKKKLVEDLDS 1023
Query: 337 LRAQSFNMEQAN 372
L + ++AN
Sbjct: 1024 LDDKLAAEKRAN 1035
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 145 TDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMRE 255
+D + +G A+++ Q+ +L+ E+R YK +S++ E
Sbjct: 762 SDDLGRDEGAAESLLQRHARLEEEIRAYKSDISRLEE 798
>Z81457-1|CAB03812.1| 423|Caenorhabditis elegans Hypothetical
protein C01G12.1 protein.
Length = 423
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 157 KNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDS 336
+++DG D ++ + E K KD+ +GP K + +AM +LK+ + Q +
Sbjct: 180 QSLDGNLDGVDGDGD--EEEDLKIKDEDEVEEDGPEKVKSQSEAMAMLKEAISAQSQQQT 237
Query: 337 LRAQSFNMEQ 366
+AQ Q
Sbjct: 238 QQAQQVQQVQ 247
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical
protein R31.1 protein.
Length = 4063
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 145 TDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMRE 255
+D + +G A+++ Q+ +L+ E+R YK +S++ E
Sbjct: 762 SDDLGRDEGAAESLLQRHARLEEEIRAYKSDISRLEE 798
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 184 IEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQSFNME 363
+++K++ L +E + Q+ + AKN K RVL + Y+ ++D L+ +SF +
Sbjct: 299 LKKKIEVLKSENHRLSSQIQQNTNEAAKNHEKLLEDRVLLLETRYQLEVDDLK-KSFESD 357
Query: 364 Q 366
+
Sbjct: 358 K 358
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 145 TDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMRE 255
+D + +G A+++ Q+ +L+ E+R YK +S++ E
Sbjct: 762 SDDLGRDEGAAESLLQRHARLEEEIRAYKSDISRLEE 798
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +1
Query: 163 VDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLR 342
VDGR D I Q +LD + S + P+K V + + R +K Y+ +D+ R
Sbjct: 377 VDGRRDEIRQYAPELDWISNSFGFLGSIPKHNPSK-EVNRVSFRGCMKKVRYD--IDATR 433
Query: 343 AQSFNMEQANYATQTLK 393
N+ +Y +K
Sbjct: 434 ILLVNLADQSYGGSVVK 450
>U88172-10|AAM97988.1| 437|Caenorhabditis elegans Hypothetical
protein ZK354.2b protein.
Length = 437
Score = 28.3 bits (60), Expect = 2.7
Identities = 23/123 (18%), Positives = 49/123 (39%)
Frame = +1
Query: 73 YKRFKPNMNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMR 252
Y R + +LF ++K P DC+ + G + + L+ D K
Sbjct: 290 YDRIADGIQKLFEKSKSNTQEPPDWDCMTDYKGPGYQQVPMIAPPEVGLKPEMD-FGKSD 348
Query: 253 EGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTTISAMKDGV 432
G SV+Q + +KK +++ D +S ++ + ++ K + ++ K
Sbjct: 349 PGAGGGSVEQPKKEEVDKKKKKKKKGDGSSNRSERENRSEKSQKSQKSSRKSVREKKAQR 408
Query: 433 TQK 441
+Q+
Sbjct: 409 SQR 411
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 195 FLFNIIGSAIYVFNAIRNAGARFFGFRSSE*SVHVWFKTLIELGK 61
FLF +IGS YV +R GF S E +++ + L + K
Sbjct: 188 FLFKLIGSRTYVSALLRRITGSDIGFHSREDIINIGSEDLKAISK 232
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 139 SITDCIKNVDGRADNIEQKVQKLDT-ELRKYKDQMSKMREGPAKNSVKQKAM 291
SI + ++D ++ + Q L ++ ++KD + KM++GP +++ M
Sbjct: 206 SIEKSLDSIDQVLPDLPRAFQPLRVVQIERFKDALKKMKKGPILREIQKNCM 257
>Z92777-2|CAB07167.1| 387|Caenorhabditis elegans Hypothetical
protein C17H1.3 protein.
Length = 387
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 202 KLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQANYAT 381
+LD +K + K E + VKQ A+++L+ K +++ + +EQA +
Sbjct: 156 ELDKHHKKMLKMVEKSHEDCTREKVKQHALKMLEMKNEGQRKAIEHKIVMEKLEQARGMS 215
Query: 382 QTL 390
Q L
Sbjct: 216 QRL 218
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 27.5 bits (58), Expect = 4.7
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = -3
Query: 390 QCLR--C-IICLFHVERLGTETIKLLFIHFLLFQYSHCFLLD*IFSRTLPHFAHLILVFS 220
+CL+ C +I FH TE+ + F+L +Y H ++ I + L F L +
Sbjct: 107 KCLKSKCSVIVYFHGGAYNTESATMFSDRFILDRYVHEDVIFVIPAVRLGVFGQLYFGPN 166
Query: 219 KFCVQFLDFLFNIIGSAIYVFNAIRNAG 136
+ + L F+F+ I + +V N I N G
Sbjct: 167 AYLTENL-FMFDAILALDFVHNEISNFG 193
>Z54342-13|CAH60747.1| 123|Caenorhabditis elegans Hypothetical
protein C08H9.3b protein.
Length = 123
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -3
Query: 270 IFSRTLPHFAHLILVFSKFCVQFLDFLFNIIGSAIYVFNAI 148
+ S+T P F+ IL+F +F V F D L + SA+Y +A+
Sbjct: 85 VISKT-PRFSRRILIFQRFSVIFCDIL---LLSALYTPSAL 121
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 27.5 bits (58), Expect = 4.7
Identities = 16/87 (18%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 181 NIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQL--DSLRAQSF 354
++ + QKL E K ++ ++M + + KQ+ ++LK++ ++ ++ + L+ Q
Sbjct: 275 SLMSQFQKLRVETSKIYNEFTEMVKNETSDMKKQQETQILKEQDEFQDEIRQEFLKIQEN 334
Query: 355 NMEQANYATQTLKDTHTTISAMKDGVT 435
+ LK T ++ K+ ++
Sbjct: 335 ENKLIEKLMSELKTLKTELNETKNQIS 361
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 27.5 bits (58), Expect = 4.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 151 CIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKN---SVKQKAMRVLKQKKMY 318
C KNV A N+++ +K ++K + +KM + AKN K+ A V K K Y
Sbjct: 1274 CAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNVQKMCKKCAKNVQKMCKKY 1332
>AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical
protein T22E7.2 protein.
Length = 257
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 378 CIICLFHVERLGTETIKLLFIHFLLFQ 298
C+IC+ L T LL+ HF LF+
Sbjct: 134 CVICIIIYGVLSVTTAHLLYFHFKLFK 160
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 27.1 bits (57), Expect = 6.2
Identities = 21/86 (24%), Positives = 31/86 (36%)
Frame = +1
Query: 82 FKPNMNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGP 261
FK +N P E ++T+ NVD D+ E K +L Y+ S
Sbjct: 143 FKSELNHHNYAISPSEEDVALTEDQTNVDVEDDDFEAKNDQLSRASSNYQFTSSVPNTND 202
Query: 262 AKNSVKQKAMRVLKQKKMYEQQLDSL 339
N K V + K +Q + L
Sbjct: 203 TANLENDKRDEVERLKAELARQAEKL 228
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +1
Query: 205 LDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQK 309
LD E R+ D ++RE SVK +AMR+++QK
Sbjct: 40 LDKE-RQILDLQERVREHNEVASVKNQAMRIVQQK 73
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 27.1 bits (57), Expect = 6.2
Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 172 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSV--KQKAMRVLKQKKMYEQQLDSLRA 345
R + +E++ ++ + K + +K+RE ++ KQK ++K++YE++ R
Sbjct: 918 RIEEVEEQRKREAEDKEKIEQLNAKVREKEERSEARRKQKEKDDEEEKRLYEEKEKEQRK 977
Query: 346 QSFNMEQANYATQTLKDTHTT 408
+ + + KD H T
Sbjct: 978 KQIKGIEKWTKSMDFKDNHKT 998
>Z82278-2|CAB05254.1| 170|Caenorhabditis elegans Hypothetical
protein M162.2 protein.
Length = 170
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 139 SITDCIKNVDGRADNIEQKVQKLDTELRKYKD 234
S+TDC ++DG+ I+ K T L KY+D
Sbjct: 15 SLTDC-PDIDGQTREIKGICYKFVTSLMKYED 45
>Z81453-6|CAH04639.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.10 protein.
Length = 283
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 369 CLFHVERLGTETIKLLFIHFLLFQYSHCFLLD*I-FSRTLP 250
C F V+ + T I +L I+FLL Q S F++ + FS +P
Sbjct: 47 CRFGVDLVYTVVILILKIYFLLTQISTDFIIKNVHFSLVIP 87
>Z68159-6|CAA92287.5| 485|Caenorhabditis elegans Hypothetical
protein C33D9.6 protein.
Length = 485
Score = 26.6 bits (56), Expect = 8.2
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 91 NMNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKL-DTELRKYKDQMSKMREGPAK 267
N L +A+ K I C+K V+ +E K QKL D E R+Y+ + +
Sbjct: 155 NKINLEAKAQEKIQEEIIQRCMKRVEDLESILETKEQKLNDFEEREYETTCQLTMKHSLE 214
Query: 268 NSVKQKAMRVLKQKKMYEQQLDSLRAQSFNMEQANYATQTLKDTHTT 408
+ +K ++L+ +K Y + ++ + E +Q KD +T
Sbjct: 215 --LAEKDQKILELEK-YIRNNENQDVVALTRELERLRSQATKDEPST 258
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 26.6 bits (56), Expect = 8.2
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +1
Query: 124 KEPGPSIT-DCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKA-MRV 297
KE IT D +VD R +EQ++QK + E + +++++ + A N KA M
Sbjct: 258 KEQQQLITVDNDDSVDPRIREMEQRIQKTEEE---WTNRINESDQQHAINLATTKAEMHA 314
Query: 298 LKQKKMYEQQLDSLRAQSFNMEQANY-ATQTLKDTHTTISAMKDGVTQKK 444
+ K + +++ R + +EQ + A Q D + AM + +K
Sbjct: 315 ALENK--DSEIEQWRRKCATLEQQDADANQRWSDKVEKVQAMNKALESEK 362
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 26.6 bits (56), Expect = 8.2
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Frame = +1
Query: 157 KNVDGRADNIEQKVQKLDTELRKYKDQMSK-MREGPAKNSVKQKAMRVLKQKKMYEQQLD 333
K+ + D + ++ + L ++ + Q+S M + KNS QK + + Q +D
Sbjct: 133 KSDSSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMD 192
Query: 334 S-----------LRAQSFNMEQANYATQTLKD----THTTISAMKDGVTQ 438
S LR + Q T+TLK+ + +T+S +KD + Q
Sbjct: 193 SLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQ 242
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 26.6 bits (56), Expect = 8.2
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Frame = +1
Query: 157 KNVDGRADNIEQKVQKLDTELRKYKDQMSK-MREGPAKNSVKQKAMRVLKQKKMYEQQLD 333
K+ + D + ++ + L ++ + Q+S M + KNS QK + + Q +D
Sbjct: 133 KSDSSKTDKLSEENETLKLKVEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMD 192
Query: 334 S-----------LRAQSFNMEQANYATQTLKD----THTTISAMKDGVTQ 438
S LR + Q T+TLK+ + +T+S +KD + Q
Sbjct: 193 SLSEKLSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLKDKLAQ 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,506,991
Number of Sequences: 27780
Number of extensions: 210281
Number of successful extensions: 897
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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