Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4c19
(715 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46970.1 68415.m05867 basic helix-loop-helix (bHLH) protein, ... 31 0.76
At5g45220.1 68418.m05550 Toll-Interleukin-Resistance (TIR) domai... 30 1.8
At5g17690.1 68418.m02073 like heterochromatin protein (LHP1) ide... 29 3.1
At4g28600.1 68417.m04090 calmodulin-binding protein similar to p... 29 3.1
At4g12330.1 68417.m01951 cytochrome P450 family protein contains... 29 3.1
At4g36010.1 68417.m05127 pathogenesis-related thaumatin family p... 29 4.0
At5g36920.1 68418.m04425 expressed protein predicted protein, Ar... 28 5.3
At2g17860.1 68415.m02069 pathogenesis-related thaumatin family p... 28 5.3
At4g02570.1 68417.m00351 cullin family protein similar to cullin... 28 7.1
At2g04080.1 68415.m00391 MATE efflux family protein similar to h... 28 7.1
At1g59520.3 68414.m06686 expressed protein (CW7) 28 7.1
At1g49350.1 68414.m05532 pfkB-type carbohydrate kinase family pr... 28 7.1
At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family prote... 28 7.1
At2g24810.1 68415.m02968 pathogenesis-related thaumatin family p... 27 9.3
>At2g46970.1 68415.m05867 basic helix-loop-helix (bHLH) protein,
putative similar to PIF3 like basic Helix Loop Helix
protein (PIL1) [Arabidopsis thaliana] GI:22535492;
contains Myc-type, 'helix-loop-helix' dimerization
domain signature, PROSITE:PS00038
Length = 416
Score = 31.1 bits (67), Expect = 0.76
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Frame = +1
Query: 118 PEQQSSTETAAVCKNEKLLNKLE----SSSYNKSNMDQLIAI--VNFLE--KKNINYI-- 267
P+ + VC+N ++L K+ + S+ K L+ + + E KKNI +
Sbjct: 24 PKLKDEDYMELVCENGQILAKIRRPKNNGSFQKQRRQSLLDLYETEYSEGFKKNIKILGD 83
Query: 268 LNVMPVMQDERKMSKRKKKVINNNKYILFNS 360
V+PV Q + + K + +NNNK L +S
Sbjct: 84 TQVVPVSQSKPQQDKETNEQMNNNKKKLKSS 114
>At5g45220.1 68418.m05550 Toll-Interleukin-Resistance (TIR)
domain-containing protein domain signature TIR exists,
suggestive of a disease resistance protein.
Length = 546
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 196 YNKSNMDQLIAIVNFLEKKNINYILNVMP-VMQDERKMSKRKKKVINNNKYILFNSWYTK 372
YN S M + ++ LEKKNIN + + + ++S R + +I ++F S YT+
Sbjct: 22 YNGSRMGFIYHLIMALEKKNINVFVGFNGCICEPVERLSNRIESII---VLVIFTSRYTE 78
Query: 373 IK 378
K
Sbjct: 79 SK 80
>At5g17690.1 68418.m02073 like heterochromatin protein (LHP1)
identical to like heterochromatin protein LHP1
[Arabidopsis thaliana] GI:15625407; contains Pfam
profile PF00385: 'chromo' (CHRromatin Organization
MOdifier)
Length = 445
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 373 IKQPEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGK 483
IK WP + W+ ++N +AD + F+ + K GK
Sbjct: 127 IKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGK 163
>At4g28600.1 68417.m04090 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]
Length = 739
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/95 (20%), Positives = 39/95 (41%)
Frame = +1
Query: 37 VGH*XNISSRIXAGRFKGLQKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMD 216
VG N SS + + +K + N+ E + S + E+ L Y K N++
Sbjct: 48 VGRDYNGSSALSTAESENAKKLDNGNIEEAELSLRETSSLNYEEARALLGRIEYQKGNIE 107
Query: 217 QLIAIVNFLEKKNINYILNVMPVMQDERKMSKRKK 321
+ + ++ I + ++++RK +R K
Sbjct: 108 AALRVFEGIDINGITVKMKTALTVREDRKHRRRSK 142
>At4g12330.1 68417.m01951 cytochrome P450 family protein contains
Pfam profile:PF00067 cytochrome p450
Length = 518
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/47 (23%), Positives = 29/47 (61%)
Frame = +1
Query: 166 KLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERKM 306
+L+NKLE + +D+++ N +E+K+I + ++ +M++ ++
Sbjct: 332 ELINKLEIMKRAQQELDKVVGKNNIVEEKHITKLPYILSIMKETLRL 378
>At4g36010.1 68417.m05127 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 301
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 134 EDCCSGMFTMFDFCKPLKRPAXILDDIXF*CPTAWQFVCDEDT 6
E CCSG F D CKP + + CP A+ + D+ T
Sbjct: 196 EYCCSGAFGTPDTCKPSEYSQFFKNA----CPRAYSYAYDDGT 234
>At5g36920.1 68418.m04425 expressed protein predicted protein,
Arabidopsis thaliana; expression supported by MPSS
Length = 82
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 590 NSAKFALVSTAVCLFLLAGIAALSLEDDDVDRSAIFLP 477
N++ L+S +CL + G+ S+ DDD+ AI+ P
Sbjct: 5 NTSHVLLLSLLLCLMFVIGLVEASIPDDDMG-PAIYTP 41
>At2g17860.1 68415.m02069 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 253
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -3
Query: 134 EDCCSGMFTMFDFCKPLKRPAXILDDIXF*CPTAWQFVCDEDT 6
E CC+G F D C+P + CPTA+ + D+ T
Sbjct: 195 EFCCNGAFGTPDTCQPSEYSVFFKKT----CPTAYSYAYDDGT 233
>At4g02570.1 68417.m00351 cullin family protein similar to cullin 3
[Homo sapiens] GI:3639052; contains Pfam profile
PF00888: Cullin family
Length = 738
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 535 PASKKRQTAVL--TNANLAELKESCEMRDKLYSEFYSLLNETFNNNVAPLLSSIYDEVLT 708
PA Q +L T N+ K + +LY ++ E N+ V P L +DE +
Sbjct: 32 PAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDKYREAFEEYINSTVLPALREKHDEFML 91
Query: 709 RD 714
R+
Sbjct: 92 RE 93
>At2g04080.1 68415.m00391 MATE efflux family protein similar to
hypothetical protein GB:AAC27412; contains Pfam profile
PF01554: Uncharacterized membrane protein family
Length = 476
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 332 TTINTFCLTVGTLRSSSPSGLVA 400
T++ + CLT+GTL PSG+ A
Sbjct: 287 TSVLSICLTIGTLHYVIPSGVAA 309
>At1g59520.3 68414.m06686 expressed protein (CW7)
Length = 388
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 94 QKSNMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILN 273
+KS +NM S T T A+C NE L S S + +++ V + +N+ L+
Sbjct: 114 RKSFYLNMIAHTSFTVTVAICSNEALKTYQGSKDTKLSPIYKVVKTV-YASPSRVNFHLD 172
Query: 274 VMPVMQ 291
M+
Sbjct: 173 SKKAME 178
>At1g49350.1 68414.m05532 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 378
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 139 ETAAVCKNEKLLNKLESSSYNKSNMDQLIAIVNFLEKKNINYILNVMPVMQDERKMS 309
E +V K++++ + + + N D+LIA+ N L KN+ + P DE K+S
Sbjct: 160 EPVSVTKSQRIASIAKYVTIVSPNQDELIAMANALCAKNLFH-----PFRSDENKLS 211
>At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family protein
similar to monoglyceride lipase from [Homo sapiens]
GI:14594904, [Mus musculus] GI:2632162; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 324
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 392 LVARPCGIW*KTRPNWQILCSFLITLKRWVKKW 490
LVA C I K RP W + FLI + R++ W
Sbjct: 161 LVAPMCKISDKVRPKWPV-DQFLIMISRFLPTW 192
>At2g24810.1 68415.m02968 pathogenesis-related thaumatin family
protein similar to thaumatin-like protein [Arabidopsis
thaliana] GI:2435406; contains Pfam profile PF00314:
Thaumatin family
Length = 193
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 134 EDCCSGMFTMFDFCKPLKRPAXILDDIXF*CPTAWQFVCD 15
E CC+G F+ + C P K CPTA+ +V D
Sbjct: 139 EYCCTGAFSKPETCPPTKYSKIFKGA----CPTAYSYVYD 174
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.128 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,411,475
Number of Sequences: 28952
Number of extensions: 324905
Number of successful extensions: 913
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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