Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4c17
(518 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing... 115 6e-25
UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing... 105 8e-22
UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6; Nucleo... 93 3e-18
UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: ... 91 2e-17
UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified Nucleopolyhedr... 88 1e-16
UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum nucleopolyh... 78 1e-13
UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Re... 67 2e-10
UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophy... 59 7e-08
UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear p... 58 1e-07
UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticars... 50 2e-05
UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep: B... 40 0.045
UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep: ... 37 0.32
UniRef50_A0KXZ5 Cluster: Diguanylate cyclase; n=8; Shewanella|Re... 36 0.42
UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q9YVP8 Cluster: ORF MSV194 ALI motif gene family protei... 34 2.2
UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin008... 33 3.0
UniRef50_Q37938 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q08AA3 Cluster: At4g28690; n=2; Arabidopsis thaliana|Re... 33 3.9
UniRef50_Q4ZAE4 Cluster: ORF018; n=4; Staphylococcus phage 53 se... 33 5.2
UniRef50_O55709 Cluster: 069L; n=1; Invertebrate iridescent viru... 32 6.8
UniRef50_Q8SDX0 Cluster: Anti-repressor; n=19; root|Rep: Anti-re... 32 6.8
UniRef50_Q2PE72 Cluster: Beta-carotene-15,15'-monooxygenase; n=1... 32 6.8
UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridiu... 32 9.0
>UniRef50_Q9YML3 Cluster: Uncharacterized Bro-N domain-containing
protein J; n=1; Lymantria dispar MNPV|Rep:
Uncharacterized Bro-N domain-containing protein J -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 403
Score = 115 bits (277), Expect = 6e-25
Identities = 59/87 (67%), Positives = 67/87 (77%)
Frame = +1
Query: 256 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 435
M+QVKIGQFKFGQDTFTLRYVL G QVKFVAKDIAS+LK+ NC +AV +HVD KYK T
Sbjct: 1 MSQVKIGQFKFGQDTFTLRYVLG-GEQQVKFVAKDIASNLKHANCAEAVRKHVDGKYKST 59
Query: 436 YSESGARLPPSAPNSVXKQGDPLYLQP 516
+ E G A N++ KQGDPLYL P
Sbjct: 60 F-EHGEIRSHLASNALAKQGDPLYLHP 85
>UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing
protein ORF2; n=12; Nucleopolyhedrovirus|Rep:
Uncharacterized Bro-N domain-containing protein ORF2 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 328
Score = 105 bits (251), Expect = 8e-22
Identities = 52/87 (59%), Positives = 67/87 (77%)
Frame = +1
Query: 256 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 435
MA+VKIG+FKFG+DTF LRYVLE+ + QV+FVAKD+A+SLKY C A+ HVD KYK
Sbjct: 1 MARVKIGEFKFGEDTFNLRYVLER-DQQVRFVAKDVANSLKYTVCDKAIRVHVDNKYKSL 59
Query: 436 YSESGARLPPSAPNSVXKQGDPLYLQP 516
+ ++ P++ NSV K+GDPLYLQP
Sbjct: 60 FEQTIQNGGPTS-NSVVKRGDPLYLQP 85
>UniRef50_Q06KR1 Cluster: Baculovirus repeated ORF-a; n=6;
Nucleopolyhedrovirus|Rep: Baculovirus repeated ORF-a -
Anticarsia gemmatalis nuclear polyhedrosis virus
(AgMNPV)
Length = 243
Score = 93.1 bits (221), Expect = 3e-18
Identities = 54/87 (62%), Positives = 63/87 (72%)
Frame = +1
Query: 256 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 435
MAQVKIGQFKFG+DTFTLRYVL++ VKFVAKDIASSL Y +AV ++VD KYK T
Sbjct: 1 MAQVKIGQFKFGEDTFTLRYVLDK--DIVKFVAKDIASSLGYEKFSNAVKKYVDIKYKST 58
Query: 436 YSESGARLPPSAPNSVXKQGDPLYLQP 516
Y + S N+V K+GD LYLQP
Sbjct: 59 YGDQ------SFKNNV-KRGDLLYLQP 78
Score = 56.8 bits (131), Expect = 3e-07
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +2
Query: 2 DDDQMRYVLQTEPTVHHTLLEKLMKQELRPYRNSGEVYCTDFEHIKRALE 151
D DQMRYVL T+ H E ++K+ L PY+N EV+ DFEH++R +E
Sbjct: 178 DFDQMRYVLWTDVVAGHVAAEAVVKRRLAPYKNCNEVFQCDFEHVRRVVE 227
>UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep:
BRO-B - Clanis bilineata nucleopolyhedrosis virus
Length = 339
Score = 90.6 bits (215), Expect = 2e-17
Identities = 51/84 (60%), Positives = 59/84 (70%)
Frame = +1
Query: 265 VKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSE 444
VKIG FKFG+DTF LRYV+E+ VKFVAKD+AS+LK+ N K AV HVD+KYK TY E
Sbjct: 5 VKIGNFKFGEDTFRLRYVVER--EIVKFVAKDVASNLKHQNTKKAVKDHVDEKYKSTY-E 61
Query: 445 SGARLPPSAPNSVXKQGDPLYLQP 516
G + S V K GD LYLQP
Sbjct: 62 MGKEVVTSNLEPVNK-GDSLYLQP 84
>UniRef50_Q287E9 Cluster: BRO-D; n=3; unclassified
Nucleopolyhedrovirus|Rep: BRO-D - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 336
Score = 88.2 bits (209), Expect = 1e-16
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 9/96 (9%)
Frame = +1
Query: 256 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 435
MAQVKIG FKFG+D F LRYV++ + QV FV KDIA LKY +CK A+ +HV++KYK
Sbjct: 1 MAQVKIGVFKFGEDEFELRYVVDN-DMQVLFVGKDIARVLKYNDCKQAIHKHVNEKYKCV 59
Query: 436 YSESGAR--LPPSAPNS-------VXKQGDPLYLQP 516
+ + G + PP ++ K+G+PLYLQP
Sbjct: 60 FEKMGGQNDAPPCFDDNEGVRGEVAIKKGNPLYLQP 95
>UniRef50_Q287M2 Cluster: BRO-A; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: BRO-A - Agrotis segetum
nuclear polyhedrosis virus (AsNPV)
Length = 324
Score = 77.8 bits (183), Expect = 1e-13
Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 MAQVKIGQFKFGQDTFTLRYVLEQGNPQ-VKFVAKDIASSLKYGNCKDAVSRHVDKKYKY 432
M QVKIG FKFG+D F LRYV+ GN + V FVAKDIAS LKY +AV++HVDKKYK
Sbjct: 1 MPQVKIGVFKFGEDKFKLRYVV--GNDKDVLFVAKDIASVLKYEKPANAVAKHVDKKYKC 58
Query: 433 TYSESGARL 459
+ E G R+
Sbjct: 59 YFLEKGPRI 67
>UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Rep:
BRO - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 334
Score = 67.3 bits (157), Expect = 2e-10
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = +1
Query: 256 MAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYKYT 435
MA VKI FKFG + LRYV+ N +V FV KDIA+ LKY N K A+ HVD KYK
Sbjct: 1 MASVKINLFKFGDEEIELRYVIGD-NDEVFFVGKDIATMLKYENTKKAIIDHVDDKYKIA 59
Query: 436 YSESGARLPPSAPNS 480
+ + +P N+
Sbjct: 60 FGDIKTLMPSVIVNA 74
>UniRef50_Q80LR2 Cluster: Baculovirus repeated ORF; n=1; Adoxophyes
honmai NPV|Rep: Baculovirus repeated ORF - Adoxophyes
honmai nucleopolyhedrovirus
Length = 113
Score = 58.8 bits (136), Expect = 7e-08
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 349 VAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVXKQGDPLYLQ 513
+AKD+A++LKY +CK A+ +VD+KYK ++ G A NSV K+GDPLYLQ
Sbjct: 1 MAKDVAAALKYVDCKQAIRINVDEKYKCKFNR-GCTTHTPASNSVAKRGDPLYLQ 54
>UniRef50_Q0IL61 Cluster: Bro-e; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: Bro-e - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 354
Score = 58.0 bits (134), Expect = 1e-07
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +1
Query: 253 KMAQVKIGQFKFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYK 429
KM V + FKFG T LRY ++Q N V FV +DIA LKY +DA+ +HV+ KYK
Sbjct: 27 KMCTVVVRDFKFGDITMRLRYTIDQDNC-VWFVGRDIAKLLKYQRTQDAIKKHVNVKYK 84
>UniRef50_Q06KD3 Cluster: Baculovirus repeated ORF; n=1; Anticarsia
gemmatalis nucleopolyhedrovirus|Rep: Baculovirus
repeated ORF - Anticarsia gemmatalis nuclear
polyhedrosis virus (AgMNPV)
Length = 60
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +1
Query: 391 KDAVSRHVDKKYKYTYSESGARLPPSAPNSVXKQGDPLYLQP 516
++AV++HVD KYK+TY E + A ++V KQ DPLYLQP
Sbjct: 6 RNAVNQHVDDKYKFTYGEQTPGVRAPAADTVAKQRDPLYLQP 47
>UniRef50_Q8QLB1 Cluster: BRO-g; n=3; Nucleopolyhedrovirus|Rep:
BRO-g - Mamestra configurata NPV-A
Length = 235
Score = 39.5 bits (88), Expect = 0.045
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 8 DQMRYVLQTEPTVHHTLLEKLMKQELRPYRNSGEVYCTDFEHI 136
D +R + + P++H+ +E+ MK L Y+++GEVYC + I
Sbjct: 179 DVLRLLFHSPPSIHYAKIERDMKLALHEYQDNGEVYCVPLQVI 221
>UniRef50_A6TLJ8 Cluster: Prophage antirepressor; n=5; root|Rep:
Prophage antirepressor - Alkaliphilus metalliredigens
QYMF
Length = 276
Score = 36.7 bits (81), Expect = 0.32
Identities = 22/49 (44%), Positives = 30/49 (61%)
Frame = +1
Query: 283 KFGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYK 429
+FGQ +R + + G P FV KDIA SL Y N DA+ +HVD++ K
Sbjct: 12 EFGQ----VRVLRQDGQPW--FVGKDIADSLGYKNPSDALLKHVDEEDK 54
>UniRef50_A0KXZ5 Cluster: Diguanylate cyclase; n=8; Shewanella|Rep:
Diguanylate cyclase - Shewanella sp. (strain ANA-3)
Length = 726
Score = 36.3 bits (80), Expect = 0.42
Identities = 25/75 (33%), Positives = 31/75 (41%)
Frame = -1
Query: 488 FXTLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNLTCGFPCSSTYL 309
F LF A G LA S +VYL FL L + F +L S+ L G P YL
Sbjct: 58 FTALFTATGLMLAWSSAHVYLVFLLEALWLGFARRRDFPILYASICYWLLLGLPLMGLYL 117
Query: 308 SVNVSWPNLNCPILT 264
+ P + P T
Sbjct: 118 WLITGMPTYHIPFTT 132
>UniRef50_A6N1W8 Cluster: Putative uncharacterized protein; n=1;
Microbacterium phage Min1|Rep: Putative uncharacterized
protein - Microbacterium phage Min1
Length = 250
Score = 34.7 bits (76), Expect = 1.3
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +1
Query: 286 FGQDTFTLRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRH 411
FG D +R VL +G P +FVA+D+AS+L Y + A+ +H
Sbjct: 4 FGFDGHHVRVVLVEGLP--RFVARDVASALGYTDPTSAIKQH 43
>UniRef50_Q9YVP8 Cluster: ORF MSV194 ALI motif gene family protein;
n=2; Melanoplus sanguinipes entomopoxvirus|Rep: ORF
MSV194 ALI motif gene family protein - Melanoplus
sanguinipes entomopoxvirus (MsEPV)
Length = 409
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 346 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGARLPPSAPNSVXKQGDPLYL 510
F KDIA L+Y + DA+ +HVD K Y + R P P+ + + +Y+
Sbjct: 24 FKGKDIAEILEYKDTNDAIKKHVDDDDKSKYEDLINR-PGILPSLTYNEKNTIYI 77
>UniRef50_Q92FM4 Cluster: Lin0080 protein; n=14; root|Rep: Lin0080
protein - Listeria innocua
Length = 257
Score = 33.5 bits (73), Expect = 3.0
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 307 LRYVLEQGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKKYK 429
+R V + P F+ KD+A L Y N +DA+ RHV K K
Sbjct: 14 VRTVFIENEPH--FIGKDVAKVLGYSNSRDALKRHVFLKNK 52
>UniRef50_Q37938 Cluster: Putative uncharacterized protein; n=1;
Lactobacillus phage LL-H|Rep: Putative uncharacterized
protein - Lactococcus delbrueckii bacteriophage LL-H
Length = 69
Score = 33.5 bits (73), Expect = 3.0
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 325 QGNPQVKFVAKDIASSLKYGNCKDAVSRHVDKK 423
Q N + FV KD+A+ L Y DAV +HVD++
Sbjct: 19 QINGEAWFVGKDVATVLGYARTADAVRKHVDEE 51
>UniRef50_Q08AA3 Cluster: At4g28690; n=2; Arabidopsis thaliana|Rep:
At4g28690 - Arabidopsis thaliana (Mouse-ear cress)
Length = 448
Score = 33.1 bits (72), Expect = 3.9
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 2 DDDQMRYVLQTEPTVHHTLLEKLMKQELRPYRNSGEVYCTDFEHIKRA 145
DDD +L +PT T++E + GEV C DF H + A
Sbjct: 54 DDDDDCVILDFDPTAKETVIETCETDGVLVVGQKGEVACRDFPHPRHA 101
>UniRef50_Q4ZAE4 Cluster: ORF018; n=4; Staphylococcus phage 53 sensu
lato|Rep: ORF018 - Staphylococcus phage 92
Length = 245
Score = 32.7 bits (71), Expect = 5.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 346 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGA 453
FV KDIA L Y +A+ HVD + K T+ S +
Sbjct: 25 FVGKDIAEILGYARADNAIRNHVDSEDKLTHQFSAS 60
>UniRef50_O55709 Cluster: 069L; n=1; Invertebrate iridescent virus
6|Rep: 069L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 230
Score = 32.3 bits (70), Expect = 6.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 346 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSE 444
F K+IA L + KDA+ +HV KYK T S+
Sbjct: 44 FFGKEIAEFLGFKKPKDALQKHVKPKYKTTLSK 76
>UniRef50_Q8SDX0 Cluster: Anti-repressor; n=19; root|Rep:
Anti-repressor - Bacteriophage phi-11
Length = 274
Score = 32.3 bits (70), Expect = 6.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 346 FVAKDIASSLKYGNCKDAVSRHVDKKYKYTYSESGA 453
FV KDIA L Y +A+ HVD + K T+ S +
Sbjct: 36 FVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSAS 71
>UniRef50_Q2PE72 Cluster: Beta-carotene-15,15'-monooxygenase; n=1;
Ciona intestinalis|Rep:
Beta-carotene-15,15'-monooxygenase - Ciona intestinalis
(Transparent sea squirt)
Length = 524
Score = 32.3 bits (70), Expect = 6.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 388 CKDAVSRHVDKKYKYTYSESGARLPP 465
C ++++ KKYKY YS G +LPP
Sbjct: 410 CAVINNKYIGKKYKYFYSPGGLKLPP 435
>UniRef50_A3QSE3 Cluster: Putative antirepressor; n=1; Clostridium
phage phiC2|Rep: Putative antirepressor - Clostridium
phage phiC2
Length = 212
Score = 31.9 bits (69), Expect = 9.0
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 346 FVAKDIASSLKYGNCKDAVSRH 411
FV KDIA SL Y N DA+ RH
Sbjct: 26 FVGKDIAKSLGYKNTNDAILRH 47
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,026,842
Number of Sequences: 1657284
Number of extensions: 8540820
Number of successful extensions: 26777
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 26057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26759
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -