Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4c17
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    26   0.23 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.7  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   8.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   8.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 87  LNSCFISFSSSVWCTVGSVCSTYR 16
           ++SC   FSSS WC   +  S  R
Sbjct: 135 VSSCHQGFSSSTWCNYSAYSSASR 158


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 480 AVWSRGR*SRPRLAVRIFVFFIHVSAYSVFT 388
           A+W+R R +  +   R++ F +H+S   + T
Sbjct: 59  ALWTRRRYAGRKKLSRMYFFILHLSIADLIT 89


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 428 NIRTASRGRDYRPRLQTAXQSKAI 499
           NIR    GR   PR+ T   +  I
Sbjct: 335 NIRARRTGRKVSPRVNTIKHTSCI 358


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -1

Query: 122 PCSRPRRCCGT 90
           P  RP RCC T
Sbjct: 97  PVHRPGRCCKT 107



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +2

Query: 449 GRDYRPRLQTAXQSKAIRCIC 511
           G +Y P + +  + K + C C
Sbjct: 858 GSEYHPSIVSLGEYKCVTCKC 878


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 428 NIRTASRGRDYRPRLQTAXQSKAI 499
           NIR    GR   PR+ T   +  I
Sbjct: 335 NIRARRTGRKVSPRVNTIKHTSCI 358


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 464 GGSLAPDSLYVYLYFLSTCLLTASLQFPYFK 372
           G  LAP+  Y+ +   S  + T  L F YF+
Sbjct: 113 GRFLAPNLTYLLVALYSGYVWTDILGFGYFR 143


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 506 YSGSPCFXTLFGAEGGSLA 450
           +SG P   T+FG   G+ A
Sbjct: 174 FSGDPNNVTIFGESAGAAA 192


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 506 YSGSPCFXTLFGAEGGSLA 450
           +SG P   T+FG   G+ A
Sbjct: 176 FSGDPNNVTIFGESAGAAA 194


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 506 YSGSPCFXTLFGAEGGSLA 450
           +SG P   T+FG   G+ A
Sbjct: 174 FSGDPNNVTIFGESAGAAA 192


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 506 YSGSPCFXTLFGAEGGSLA 450
           +SG P   T+FG   G+ A
Sbjct: 176 FSGDPNNVTIFGESAGAAA 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,728
Number of Sequences: 336
Number of extensions: 2286
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)