Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4c11
(252 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O15145 Cluster: Actin-related protein 2/3 complex subun... 120 5e-27
UniRef50_Q8IND1 Cluster: CG4560-PA, isoform A; n=1; Drosophila m... 115 2e-25
UniRef50_Q5DAS0 Cluster: SJCHGC02751 protein; n=10; Bilateria|Re... 89 2e-17
UniRef50_Q9XWV3 Cluster: Probable actin-related protein 2/3 comp... 86 2e-16
UniRef50_Q9Y7J4 Cluster: ARP2/3 complex 21 kDa subunit; n=2; Asc... 70 9e-12
UniRef50_UPI0000E233B3 Cluster: PREDICTED: similar to p21-Arc; n... 66 2e-10
UniRef50_O96624 Cluster: Actin-related protein 2/3 complex subun... 65 2e-10
UniRef50_Q05933 Cluster: ARP2/3 complex 21 kDa subunit; n=26; Di... 64 7e-10
UniRef50_Q5KAE9 Cluster: Arp2/3 complex 21 kDa subunit (P21-arc)... 61 4e-09
UniRef50_A1C5G6 Cluster: ARP2/3 complex subunit Arc18, putative;... 59 2e-08
UniRef50_O80764 Cluster: T13D8.30 protein; n=8; Magnoliophyta|Re... 49 2e-05
UniRef50_A2FJE8 Cluster: Putative uncharacterized protein; n=3; ... 46 2e-04
UniRef50_Q38BE7 Cluster: ARP2/3 complex subunit, putative; n=4; ... 43 0.001
UniRef50_UPI000049855C Cluster: ARP2/3 complex 21 kDa subunit; n... 40 0.011
UniRef50_Q7NG45 Cluster: Magnesium protoporphyrin IX chelatase s... 33 1.6
UniRef50_Q1E266 Cluster: Predicted protein; n=1; Coccidioides im... 32 2.1
UniRef50_Q2HUU3 Cluster: Disease resistance protein; Calcium-bin... 31 4.9
UniRef50_A0LHT5 Cluster: Glycoside hydrolase, family 57; n=1; Sy... 31 6.4
>UniRef50_O15145 Cluster: Actin-related protein 2/3 complex subunit
3; n=35; Metazoa|Rep: Actin-related protein 2/3 complex
subunit 3 - Homo sapiens (Human)
Length = 178
Score = 120 bits (290), Expect = 5e-27
Identities = 50/78 (64%), Positives = 65/78 (83%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY+SECL++LQKC+ K+QG++EMY L I+ F IPGEPGFPLN++YA P ++QE ++M
Sbjct: 70 YITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVM 129
Query: 181 RQYLQQLRHXTGTRVCEK 234
R YLQQLR TG R+CEK
Sbjct: 130 RAYLQQLRQETGLRLCEK 147
>UniRef50_Q8IND1 Cluster: CG4560-PA, isoform A; n=1; Drosophila
melanogaster|Rep: CG4560-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 139
Score = 115 bits (277), Expect = 2e-25
Identities = 51/78 (65%), Positives = 63/78 (80%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY++ECL++L + + K QGQQ+MY LAIS FDIPG+ GFPLN+VYA P + Q++DLM
Sbjct: 31 YVTLYITECLKKLNRSTSKAQGQQDMYSLAISKFDIPGDAGFPLNAVYAKPQTAQDADLM 90
Query: 181 RQYLQQLRHXTGTRVCEK 234
RQYL QLRH TG RV EK
Sbjct: 91 RQYLLQLRHETGNRVLEK 108
>UniRef50_Q5DAS0 Cluster: SJCHGC02751 protein; n=10; Bilateria|Rep:
SJCHGC02751 protein - Schistosoma japonicum (Blood
fluke)
Length = 181
Score = 88.6 bits (210), Expect = 2e-17
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFP--LNSVYAXPTSQQESD 174
Y LY+ ECLR+LQKC + G +E+ ++IS FDIPG+P FP LN++YA P + E +
Sbjct: 70 YLILYILECLRKLQKCPNRTIGAKELAAMSISRFDIPGDPDFPRELNNMYAKPRNSTEME 129
Query: 175 LMRQYLQQLRHXTGTRVCEKXIC 243
+MR YL QLR G R+ E+ C
Sbjct: 130 IMRGYLTQLRQELGVRLLERVYC 152
>UniRef50_Q9XWV3 Cluster: Probable actin-related protein 2/3 complex
subunit 3; n=2; Caenorhabditis|Rep: Probable
actin-related protein 2/3 complex subunit 3 -
Caenorhabditis elegans
Length = 183
Score = 85.8 bits (203), Expect = 2e-16
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXF-DIPGEPGFPLNSVYAXPTSQQESDL 177
Y Y++ECLR+LQK K GQ++++ LA+S IPGE GFPLNS+Y P S+ + D
Sbjct: 72 YLIFYITECLRKLQKSPNKIAGQKDLHALALSHLLPIPGENGFPLNSMYKAPQSKPDEDE 131
Query: 178 MRQYLQQLRHXTGTRVCE 231
MR YLQQ+R G R+C+
Sbjct: 132 MRAYLQQIRQEIGARLCD 149
>UniRef50_Q9Y7J4 Cluster: ARP2/3 complex 21 kDa subunit; n=2;
Ascomycota|Rep: ARP2/3 complex 21 kDa subunit -
Schizosaccharomyces pombe (Fission yeast)
Length = 174
Score = 70.1 bits (164), Expect = 9e-12
Identities = 31/75 (41%), Positives = 49/75 (65%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TL++SECL R+ + ++ ++++ LA+ F IPG GFPLN++YA P S Q++++M
Sbjct: 72 YGTLFISECLGRVNGLNYRD-AERQLNSLALENFSIPGSAGFPLNALYAPPLSPQDAEIM 130
Query: 181 RQYLQQLRHXTGTRV 225
R YL Q R R+
Sbjct: 131 RTYLTQFRQELAYRL 145
>UniRef50_UPI0000E233B3 Cluster: PREDICTED: similar to p21-Arc; n=1;
Pan troglodytes|Rep: PREDICTED: similar to p21-Arc - Pan
troglodytes
Length = 136
Score = 65.7 bits (153), Expect = 2e-10
Identities = 36/78 (46%), Positives = 46/78 (58%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY+SECL++LQK PGFPLN++YA P ++QE ++M
Sbjct: 52 YITLYISECLKKLQK------------------------PGFPLNAIYAKPANKQEDEVM 87
Query: 181 RQYLQQLRHXTGTRVCEK 234
R YLQQLR TG R+CEK
Sbjct: 88 RAYLQQLRQETGLRLCEK 105
>UniRef50_O96624 Cluster: Actin-related protein 2/3 complex subunit
3; n=2; Dictyostelium discoideum|Rep: Actin-related
protein 2/3 complex subunit 3 - Dictyostelium discoideum
(Slime mold)
Length = 174
Score = 65.3 bits (152), Expect = 2e-10
Identities = 27/78 (34%), Positives = 47/78 (60%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY+++CL ++ + K ++ ++++A F IPGE FPL + P ++ +D +
Sbjct: 72 YLTLYITKCLLKIAPMN-KADAEKALFLIAQEQFSIPGESAFPLGGLVTVPNTRDAADTL 130
Query: 181 RQYLQQLRHXTGTRVCEK 234
RQY QLR G R+C++
Sbjct: 131 RQYFTQLRLELGVRLCQR 148
>UniRef50_Q05933 Cluster: ARP2/3 complex 21 kDa subunit; n=26;
Dikarya|Rep: ARP2/3 complex 21 kDa subunit -
Saccharomyces cerevisiae (Baker's yeast)
Length = 178
Score = 63.7 bits (148), Expect = 7e-10
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQES-DL 177
Y L++++CL L+ + N+ + + +A+ F +PG PGFPLN+VY P S DL
Sbjct: 72 YGILFINDCLAHLKITTSFNEAVKVLTNVALDNFTLPGTPGFPLNNVYQVPVQDHNSMDL 131
Query: 178 MRQYLQQLRHXTGTRVCEK 234
++ Y+QQ R R+ E+
Sbjct: 132 LKTYIQQFRQELAMRLLER 150
>UniRef50_Q5KAE9 Cluster: Arp2/3 complex 21 kDa subunit (P21-arc),
putative; n=1; Filobasidiella neoformans|Rep: Arp2/3
complex 21 kDa subunit (P21-arc), putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 222
Score = 61.3 bits (142), Expect = 4e-09
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXK-----NQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQ 165
Y L++S+CL +L + K + + + L++ F +PG+ GFPLNS+Y P S+
Sbjct: 96 YLILFISDCLTKLAPTAGKPSPSYQEATKVLQTLSVDNFALPGDAGFPLNSLYHPPASRV 155
Query: 166 ESDLMRQYLQQLRHXTGTRVCEK 234
++D +R YL Q R R+C++
Sbjct: 156 DADHLRSYLTQTRCELALRLCDR 178
>UniRef50_A1C5G6 Cluster: ARP2/3 complex subunit Arc18, putative;
n=2; Aspergillus|Rep: ARP2/3 complex subunit Arc18,
putative - Aspergillus clavatus
Length = 219
Score = 59.3 bits (137), Expect = 2e-08
Identities = 23/75 (30%), Positives = 44/75 (58%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TL++SECL +++ + ++ + +++ F IPG+ FPLN + P +Q+++ +
Sbjct: 117 YGTLFISECLGKVKPGMTSREAEKALINVSLDHFAIPGDVAFPLNQAFEPPRDRQDAETL 176
Query: 181 RQYLQQLRHXTGTRV 225
R YL Q+R R+
Sbjct: 177 RAYLSQVRQEIAIRL 191
>UniRef50_O80764 Cluster: T13D8.30 protein; n=8; Magnoliophyta|Rep:
T13D8.30 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 263
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQE---- 168
Y T Y++ L+RL+ C G + + L + +PGE GFP +++ P SQ E
Sbjct: 145 YLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSLPQSQDEAVTW 204
Query: 169 -----------SDLMRQYLQQLRHXTGTRV 225
S+L R YL+Q+R T R+
Sbjct: 205 SLALCSVWLQMSELFRNYLKQVREETSGRL 234
>UniRef50_A2FJE8 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 181
Score = 45.6 bits (103), Expect = 2e-04
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSX-KNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDL 177
Y T Y +CL+ K K + Q E+ + F IPGE GF ++S P ++ E
Sbjct: 76 YLTFYGMKCLKFFAKNKKDKAKCQLEIDGWNLKPFPIPGEGGFIIDSYVTAPKNENEKRQ 135
Query: 178 MRQYLQQLRHXTGTRVCEK 234
+R Y ++LR G R+ +K
Sbjct: 136 LRDYFKKLRIEMGNRLLQK 154
>UniRef50_Q38BE7 Cluster: ARP2/3 complex subunit, putative; n=4;
Trypanosoma|Rep: ARP2/3 complex subunit, putative -
Trypanosoma brucei
Length = 183
Score = 43.2 bits (97), Expect = 0.001
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y T Y+ EC++ L + +N+ Q+ M A+ P + GF + ++ P E D
Sbjct: 81 YLTWYLHECIKSLVGLN-RNEAQKAMLNRAVEGVVAPVDEGFVFSRFFS-PGDDSEQDRW 138
Query: 181 RQYLQQLRHXTGTRVCEK 234
+ Y QLR G+R+ EK
Sbjct: 139 KSYATQLRVEAGSRLVEK 156
>UniRef50_UPI000049855C Cluster: ARP2/3 complex 21 kDa subunit; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: ARP2/3 complex 21
kDa subunit - Entamoeba histolytica HM-1:IMSS
Length = 188
Score = 39.9 bits (89), Expect = 0.011
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y Y+ L + + K + + Y LAI F +PG+ F L + P E +++
Sbjct: 87 YLIFYIQSLLLKFNGRT-KVECDKMAYSLAIENFALPGDGKFCLGGI-VEPLKASEKEVV 144
Query: 181 RQYLQQLRHXTGTRVCE 231
RQY+ +R+ TG R+ +
Sbjct: 145 RQYMTAIRNETGLRLTQ 161
>UniRef50_Q7NG45 Cluster: Magnesium protoporphyrin IX chelatase
subunit H; n=1; Gloeobacter violaceus|Rep: Magnesium
protoporphyrin IX chelatase subunit H - Gloeobacter
violaceus
Length = 1222
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 109 PGEPGFPLNSVYAXPTSQQESDLMRQYLQQLRHXTGTRVCE 231
PGE G L+S+ + E+DL R YL + R+ G CE
Sbjct: 991 PGEYGNRLSSLIETGAWEAETDLARMYLNRTRYLYGQGACE 1031
>UniRef50_Q1E266 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 104
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 64 GQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLMRQYLQQLRHXTGTRVC 228
GQQ Y + P + G+P +Y P Q QY++ R GT +C
Sbjct: 33 GQQPQYPPPQQGYYPPPQQGYPQQGMYYGPPQQGYPPPQGQYVEDRRKDMGTGIC 87
>UniRef50_Q2HUU3 Cluster: Disease resistance protein;
Calcium-binding EF-hand; AAA ATPase; n=11;
Magnoliophyta|Rep: Disease resistance protein;
Calcium-binding EF-hand; AAA ATPase - Medicago
truncatula (Barrel medic)
Length = 1799
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 56 KIKVNKRCTCWLYPXLTF---LGNQVSRSTPYMPXLPVSKN 169
K+K+NK+C P LT+ LG Q S+S Y+ L KN
Sbjct: 93 KVKMNKKCFGGKCPNLTYNYSLGKQASKSIEYIIRLKEEKN 133
>UniRef50_A0LHT5 Cluster: Glycoside hydrolase, family 57; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Glycoside
hydrolase, family 57 - Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB)
Length = 871
Score = 30.7 bits (66), Expect = 6.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 12 ICIGMSQKTAEVFXQKSRSTRDVHVGYIXX*HSWGTRFPAQLRI 143
I + +S+KT F + R+ H + WG R PA LR+
Sbjct: 651 IALQVSRKTFASFVELQRTLYQAHQPLLTSLRQWGIRIPADLRV 694
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,662,657
Number of Sequences: 1657284
Number of extensions: 2887371
Number of successful extensions: 6200
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6193
length of database: 575,637,011
effective HSP length: 62
effective length of database: 472,885,403
effective search space used: 9930593463
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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