Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4c11
         (252 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   0.66 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   1.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   1.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   2.7  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    20   4.7  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    19   6.2  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 0.66
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 25  CLRRLQKCSXKNQGQQEMYMLA 90
           C + ++K   ++  QQE+YM A
Sbjct: 309 CYKLMEKFPERSHEQQELYMAA 330


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 114 GTRFPAQLRICXAYQSARI*FNEAV 188
           GTR P QL      Q   + FN AV
Sbjct: 171 GTRIPGQLEPANVPQMITLTFNGAV 195


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 114 GTRFPAQLRICXAYQSARI*FNEAV 188
           GTR P QL      Q   + FN AV
Sbjct: 178 GTRIPGQLEPANVPQMITLTFNGAV 202


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 124  NLVPQECQXXI*PTCTSLVDLDFCXNTSAVF*DIPIHIMXG 2
            NL+P      +  TC+S + L F    SA++  I + +  G
Sbjct: 923  NLLPIAVFILVCATCSSDIQLFFAGLISAIYGLIMMAVFVG 963


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 124  NLVPQECQXXI*PTCTSLVDLDFCXNTSAVF*DIPIHIMXG 2
            NL+P      +  TC+S + L F    SA++  I + +  G
Sbjct: 923  NLLPIAVFILVCATCSSDIQLFFAGLISAIYGLIMMAVFVG 963


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 79  YMLAISXFDIPGEPG 123
           Y+L ++   IPGE G
Sbjct: 169 YLLTVAVNSIPGEVG 183


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +2

Query: 11  YMYRNVSEDCRSVPAKIKVNKRCTCWLYPXLTFLGNQ 121
           Y Y ++S    S  AK ++ ++C   +     + GN+
Sbjct: 248 YFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNK 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,601
Number of Sequences: 336
Number of extensions: 712
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3844548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)