Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4c11
(252 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR407667-1|CAG28595.1| 178|Homo sapiens ARPC3 protein. 120 6e-28
BC078162-1|AAH78162.1| 178|Homo sapiens actin related protein 2... 120 6e-28
BC067747-1|AAH67747.1| 178|Homo sapiens actin related protein 2... 120 6e-28
AF006086-1|AAB64191.1| 178|Homo sapiens p21-Arc protein. 120 6e-28
DQ328220-1|ABC59627.1| 178|Homo sapiens actin related protein 2... 120 1e-27
AF004561-1|AAB61466.1| 178|Homo sapiens p21-Arc protein. 118 3e-27
X52882-1|CAA37064.1| 556|Homo sapiens t-complex polypeptide 1 p... 29 2.1
BT006969-1|AAP35615.1| 556|Homo sapiens t-complex 1 protein. 29 2.1
BC000665-1|AAH00665.1| 556|Homo sapiens t-complex 1 protein. 29 2.1
AL135914-7|CAI21851.1| 556|Homo sapiens t-complex 1 protein. 29 2.1
X02750-1|CAA26528.1| 461|Homo sapiens protein ( Human liver mRN... 28 4.7
M12712-1|AAA60165.1| 462|Homo sapiens PROC protein. 28 4.7
M11228-1|AAA60166.1| 461|Homo sapiens protein ( Human protein C... 28 4.7
BC034377-1|AAH34377.1| 461|Homo sapiens protein C (inactivator ... 28 4.7
AF378903-1|AAK56377.1| 461|Homo sapiens protein C protein. 28 4.7
AC068282-2|AAY15044.1| 461|Homo sapiens unknown protein. 28 4.7
>CR407667-1|CAG28595.1| 178|Homo sapiens ARPC3 protein.
Length = 178
Score = 120 bits (290), Expect = 6e-28
Identities = 50/78 (64%), Positives = 65/78 (83%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY+SECL++LQKC+ K+QG++EMY L I+ F IPGEPGFPLN++YA P ++QE ++M
Sbjct: 70 YITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVM 129
Query: 181 RQYLQQLRHXTGTRVCEK 234
R YLQQLR TG R+CEK
Sbjct: 130 RAYLQQLRQETGLRLCEK 147
>BC078162-1|AAH78162.1| 178|Homo sapiens actin related protein 2/3
complex, subunit 3, 21kDa protein.
Length = 178
Score = 120 bits (290), Expect = 6e-28
Identities = 50/78 (64%), Positives = 65/78 (83%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY+SECL++LQKC+ K+QG++EMY L I+ F IPGEPGFPLN++YA P ++QE ++M
Sbjct: 70 YITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVM 129
Query: 181 RQYLQQLRHXTGTRVCEK 234
R YLQQLR TG R+CEK
Sbjct: 130 RAYLQQLRQETGLRLCEK 147
>BC067747-1|AAH67747.1| 178|Homo sapiens actin related protein 2/3
complex, subunit 3, 21kDa protein.
Length = 178
Score = 120 bits (290), Expect = 6e-28
Identities = 50/78 (64%), Positives = 65/78 (83%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY+SECL++LQKC+ K+QG++EMY L I+ F IPGEPGFPLN++YA P ++QE ++M
Sbjct: 70 YITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVM 129
Query: 181 RQYLQQLRHXTGTRVCEK 234
R YLQQLR TG R+CEK
Sbjct: 130 RAYLQQLRQETGLRLCEK 147
>AF006086-1|AAB64191.1| 178|Homo sapiens p21-Arc protein.
Length = 178
Score = 120 bits (290), Expect = 6e-28
Identities = 50/78 (64%), Positives = 65/78 (83%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY+SECL++LQKC+ K+QG++EMY L I+ F IPGEPGFPLN++YA P ++QE ++M
Sbjct: 70 YITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVM 129
Query: 181 RQYLQQLRHXTGTRVCEK 234
R YLQQLR TG R+CEK
Sbjct: 130 RAYLQQLRQETGLRLCEK 147
>DQ328220-1|ABC59627.1| 178|Homo sapiens actin related protein 2/3
complex protein.
Length = 178
Score = 120 bits (288), Expect = 1e-27
Identities = 49/78 (62%), Positives = 65/78 (83%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY+SECL++LQKC+ K+QG++EMY + I+ F IPGEPGFPLN++YA P ++QE ++M
Sbjct: 70 YITLYISECLKKLQKCNSKSQGEKEMYTMGITNFPIPGEPGFPLNAIYAKPANKQEDEVM 129
Query: 181 RQYLQQLRHXTGTRVCEK 234
R YLQQLR TG R+CEK
Sbjct: 130 RAYLQQLRQETGLRLCEK 147
>AF004561-1|AAB61466.1| 178|Homo sapiens p21-Arc protein.
Length = 178
Score = 118 bits (284), Expect = 3e-27
Identities = 49/78 (62%), Positives = 64/78 (82%)
Frame = +1
Query: 1 YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
Y TLY+SECL++LQKC+ K+QG++EMY L I+ F IPGEPGFPLN++YA P ++QE ++M
Sbjct: 70 YITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVM 129
Query: 181 RQYLQQLRHXTGTRVCEK 234
R YL QLR TG R+CEK
Sbjct: 130 RAYLPQLRQETGLRLCEK 147
>X52882-1|CAA37064.1| 556|Homo sapiens t-complex polypeptide 1
protein.
Length = 556
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSV---YAXPTSQQESDLMRQY 189
+LAI DI G+P +P+NSV A SQ ES L+ Y
Sbjct: 176 VLAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGY 214
>BT006969-1|AAP35615.1| 556|Homo sapiens t-complex 1 protein.
Length = 556
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSV---YAXPTSQQESDLMRQY 189
+LAI DI G+P +P+NSV A SQ ES L+ Y
Sbjct: 176 VLAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGY 214
>BC000665-1|AAH00665.1| 556|Homo sapiens t-complex 1 protein.
Length = 556
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSV---YAXPTSQQESDLMRQY 189
+LAI DI G+P +P+NSV A SQ ES L+ Y
Sbjct: 176 VLAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGY 214
>AL135914-7|CAI21851.1| 556|Homo sapiens t-complex 1 protein.
Length = 556
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSV---YAXPTSQQESDLMRQY 189
+LAI DI G+P +P+NSV A SQ ES L+ Y
Sbjct: 176 VLAIKYTDIRGQPRYPVNSVNILKAHGRSQMESMLISGY 214
>X02750-1|CAA26528.1| 461|Homo sapiens protein ( Human liver mRNA
for protein C. ).
Length = 461
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSVYAXPTSQQESDLMR------QYLQQLRHXTGTRVCEKXIC 243
+L ++ + I G P PL+SV++ +S++ ++R +L++LRH + R C + IC
Sbjct: 8 LLFVATWGISGTPA-PLDSVFS--SSERAHQVLRIRKRANSFLEELRHSSLERECIEEIC 64
>M12712-1|AAA60165.1| 462|Homo sapiens PROC protein.
Length = 462
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSVYAXPTSQQESDLMR------QYLQQLRHXTGTRVCEKXIC 243
+L ++ + I G P PL+SV++ +S++ ++R +L++LRH + R C + IC
Sbjct: 8 LLFVATWGISGTPA-PLDSVFS--SSERAHQVLRIRKRANSFLEELRHSSLERECIEEIC 64
>M11228-1|AAA60166.1| 461|Homo sapiens protein ( Human protein C
gene, complete cds. ).
Length = 461
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSVYAXPTSQQESDLMR------QYLQQLRHXTGTRVCEKXIC 243
+L ++ + I G P PL+SV++ +S++ ++R +L++LRH + R C + IC
Sbjct: 8 LLFVATWGISGTPA-PLDSVFS--SSERAHQVLRIRKRANSFLEELRHSSLERECIEEIC 64
>BC034377-1|AAH34377.1| 461|Homo sapiens protein C (inactivator of
coagulation factors Va and VIIIa) protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSVYAXPTSQQESDLMR------QYLQQLRHXTGTRVCEKXIC 243
+L ++ + I G P PL+SV++ +S++ ++R +L++LRH + R C + IC
Sbjct: 8 LLFVATWGISGTPA-PLDSVFS--SSERAHQVLRIRKRANSFLEELRHSSLERECIEEIC 64
>AF378903-1|AAK56377.1| 461|Homo sapiens protein C protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSVYAXPTSQQESDLMR------QYLQQLRHXTGTRVCEKXIC 243
+L ++ + I G P PL+SV++ +S++ ++R +L++LRH + R C + IC
Sbjct: 8 LLFVATWGISGTPA-PLDSVFS--SSERAHQVLRIRKRANSFLEELRHSSLERECIEEIC 64
>AC068282-2|AAY15044.1| 461|Homo sapiens unknown protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Frame = +1
Query: 82 MLAISXFDIPGEPGFPLNSVYAXPTSQQESDLMR------QYLQQLRHXTGTRVCEKXIC 243
+L ++ + I G P PL+SV++ +S++ ++R +L++LRH + R C + IC
Sbjct: 8 LLFVATWGISGTPA-PLDSVFS--SSERAHQVLRIRKRANSFLEELRHSSLERECIEEIC 64
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,235,605
Number of Sequences: 237096
Number of extensions: 489043
Number of successful extensions: 862
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 76,859,062
effective HSP length: 61
effective length of database: 62,396,206
effective search space used: 1372716532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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