Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4c11
         (252 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024265-1|ABC86327.1|  160|Drosophila melanogaster IP15696p pro...   115   8e-27
AE014297-2092|AAN13678.1|  139|Drosophila melanogaster CG4560-PA...   115   8e-27
AE014297-2091|AAF55233.3|  190|Drosophila melanogaster CG4560-PB...   115   8e-27
AY119268-1|AAM51128.1|  174|Drosophila melanogaster SD24339p pro...   103   2e-23
AE014298-2521|AAF48696.1|  174|Drosophila melanogaster CG8936-PA...   103   2e-23
BT023002-1|AAY55418.1|  145|Drosophila melanogaster IP08468p pro...    26   6.0  
AE014297-2551|AAF55572.1|  145|Drosophila melanogaster CG7695-PA...    26   6.0  

>BT024265-1|ABC86327.1|  160|Drosophila melanogaster IP15696p
           protein.
          Length = 160

 Score =  115 bits (277), Expect = 8e-27
 Identities = 51/78 (65%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
           Y TLY++ECL++L + + K QGQQ+MY LAIS FDIPG+ GFPLN+VYA P + Q++DLM
Sbjct: 52  YVTLYITECLKKLNRSTSKAQGQQDMYSLAISKFDIPGDAGFPLNAVYAKPQTAQDADLM 111

Query: 181 RQYLQQLRHXTGTRVCEK 234
           RQYL QLRH TG RV EK
Sbjct: 112 RQYLLQLRHETGNRVLEK 129


>AE014297-2092|AAN13678.1|  139|Drosophila melanogaster CG4560-PA,
           isoform A protein.
          Length = 139

 Score =  115 bits (277), Expect = 8e-27
 Identities = 51/78 (65%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
           Y TLY++ECL++L + + K QGQQ+MY LAIS FDIPG+ GFPLN+VYA P + Q++DLM
Sbjct: 31  YVTLYITECLKKLNRSTSKAQGQQDMYSLAISKFDIPGDAGFPLNAVYAKPQTAQDADLM 90

Query: 181 RQYLQQLRHXTGTRVCEK 234
           RQYL QLRH TG RV EK
Sbjct: 91  RQYLLQLRHETGNRVLEK 108


>AE014297-2091|AAF55233.3|  190|Drosophila melanogaster CG4560-PB,
           isoform B protein.
          Length = 190

 Score =  115 bits (277), Expect = 8e-27
 Identities = 51/78 (65%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
           Y TLY++ECL++L + + K QGQQ+MY LAIS FDIPG+ GFPLN+VYA P + Q++DLM
Sbjct: 82  YVTLYITECLKKLNRSTSKAQGQQDMYSLAISKFDIPGDAGFPLNAVYAKPQTAQDADLM 141

Query: 181 RQYLQQLRHXTGTRVCEK 234
           RQYL QLRH TG RV EK
Sbjct: 142 RQYLLQLRHETGNRVLEK 159


>AY119268-1|AAM51128.1|  174|Drosophila melanogaster SD24339p
           protein.
          Length = 174

 Score =  103 bits (248), Expect = 2e-23
 Identities = 46/78 (58%), Positives = 59/78 (75%)
 Frame = +1

Query: 1   YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
           Y TLY++ECL+RL +C+ K+QGQQE+Y LAIS FDIPG+ GFPLN +Y  P   ++ +LM
Sbjct: 69  YITLYITECLKRLARCTSKSQGQQELYTLAISRFDIPGDAGFPLNGIYTKP---EDPELM 125

Query: 181 RQYLQQLRHXTGTRVCEK 234
           RQY  QLR  TG R+ EK
Sbjct: 126 RQYFLQLRQETGNRLLEK 143


>AE014298-2521|AAF48696.1|  174|Drosophila melanogaster CG8936-PA
           protein.
          Length = 174

 Score =  103 bits (248), Expect = 2e-23
 Identities = 46/78 (58%), Positives = 59/78 (75%)
 Frame = +1

Query: 1   YXTLYVSECLRRLQKCSXKNQGQQEMYMLAISXFDIPGEPGFPLNSVYAXPTSQQESDLM 180
           Y TLY++ECL+RL +C+ K+QGQQE+Y LAIS FDIPG+ GFPLN +Y  P   ++ +LM
Sbjct: 69  YITLYITECLKRLARCTSKSQGQQELYTLAISRFDIPGDAGFPLNGIYTKP---EDPELM 125

Query: 181 RQYLQQLRHXTGTRVCEK 234
           RQY  QLR  TG R+ EK
Sbjct: 126 RQYFLQLRQETGNRLLEK 143


>BT023002-1|AAY55418.1|  145|Drosophila melanogaster IP08468p
           protein.
          Length = 145

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 7/23 (30%), Positives = 18/23 (78%)
 Frame = +1

Query: 10  LYVSECLRRLQKCSXKNQGQQEM 78
           ++ ++CL ++++C+ KN G+ E+
Sbjct: 57  VFHNDCLLKVEQCARKNSGRSEL 79


>AE014297-2551|AAF55572.1|  145|Drosophila melanogaster CG7695-PA
           protein.
          Length = 145

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 7/23 (30%), Positives = 18/23 (78%)
 Frame = +1

Query: 10  LYVSECLRRLQKCSXKNQGQQEM 78
           ++ ++CL ++++C+ KN G+ E+
Sbjct: 57  VFHNDCLLKVEQCARKNSGRSEL 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,713,279
Number of Sequences: 53049
Number of extensions: 147931
Number of successful extensions: 360
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 24,988,368
effective HSP length: 63
effective length of database: 21,646,281
effective search space used: 432925620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)