Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4c09
         (212 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1542|AAZ52812.1|  209|Drosophila melanogaster CG33792-P...    27   4.7  

>AE013599-1542|AAZ52812.1|  209|Drosophila melanogaster CG33792-PA
           protein.
          Length = 209

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +1

Query: 22  VYIRVHYCNNH*KKQQYNSKMHFTYWRMSEYFCTYEIFCCIRNI 153
           + + +  C+N  +K   +   H T W    + C Y +  CI NI
Sbjct: 87  IIMEIFRCHNFLQKYAIS---HLTEWTNVNHSCPYRVSLCIYNI 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,137,249
Number of Sequences: 53049
Number of extensions: 123775
Number of successful extensions: 279
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 24,988,368
effective HSP length: 50
effective length of database: 22,335,918
effective search space used: 446718360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)