Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4c01
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   1.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.4  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    25   2.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   3.2  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   7.3  
Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    23   9.6  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   9.6  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 252  QLTVQNRQAQIAVVPSAAALIIRALKEP 335
            QL  + RQ ++AV PS+  L   A K P
Sbjct: 1610 QLLERTRQKRMAVCPSSVVLAREAFKHP 1637


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 238 RPFQSLVAL--AMSSPTFLGDRPRGPILGAKDDVAPTSPPTHRKFTILISFG 89
           RPF S+  L   +S+P  LG RP+G  LG      P+  P H    + +  G
Sbjct: 548 RPFFSIPGLPPGLSAPLGLGMRPQGGPLG-----LPSHHPLHPSLGLSMGLG 594


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 19/73 (26%), Positives = 31/73 (42%)
 Frame = +3

Query: 135 VGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALI 314
           V  T++ A    P+     +  +D   A  D + L +  ++    RQ   AVV      I
Sbjct: 2   VSQTAAAAAPADPIVDVEMESAEDAEAAKKDAELLAVQ-EIRDHARQIDKAVVSKEPRFI 60

Query: 315 IRALKEPPRDRKK 353
           +R L+  P  R+K
Sbjct: 61  LRVLRSLPTTRRK 73


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 463 SFTEPERYRAIDLFLMIFAMPITSSREMLP 374
           +F  PER  AIDL  +  ++  T+  E+LP
Sbjct: 165 TFVTPERKSAIDLTFVSQSLMETTGWEVLP 194


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 180 LSPKKVGDDIAKATSDW 230
           L PKK+ D  AK   DW
Sbjct: 200 LPPKKIKDPEAKKPEDW 216


>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
 Frame = +3

Query: 291 VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDV---IGIAKIMRNRSMARYLSGSVK 461
           V S    I+RA+    R R   +N  +N +I+L  +   +   K +R   + +  S    
Sbjct: 71  VASETPAIMRAVTAIIRHRSFDQN-SYNHDIALLKLRKPVEFTKTIRPVCLPKERSEPAG 129

Query: 462 EILGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 563
           + LGT    G T EG     L+  ++   LT+D+
Sbjct: 130 Q-LGTVVGWGRTSEGGTLPALVQHVDVPILTLDQ 162


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 186 PKKVGDDIAKATSDWKGLKIT 248
           PKK+ D++A    D  G+K+T
Sbjct: 387 PKKLDDEVAALHLDKLGVKLT 407


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,723
Number of Sequences: 2352
Number of extensions: 12815
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)