Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4b23
         (431 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   1.2  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   2.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   5.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   5.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   5.0  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   5.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   5.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.0  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 300 INEARQLSVNDLNVLIKKGKLHSDTINLKR 211
           I ++ +L  N +N L++KGK   D   LKR
Sbjct: 36  IIKSDRLLKNYVNCLLEKGKCTPDGAELKR 65


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 414 ILNFINDKIKMLNGDYVHDRGLIRGAIVFCI 322
           I   IN+++K+ +GDY    G   G   F +
Sbjct: 65  ITRVINEEVKLASGDYTLPVGTTVGIGQFLV 95


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 143 IHETRPFCKYLKT 105
           +H+T+P C+ L T
Sbjct: 106 LHDTQPMCESLNT 118


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 143 IHETRPFCKYLKT 105
           +H+T+P C+ L T
Sbjct: 106 LHDTQPMCESLNT 118


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -3

Query: 264 NVLIKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIY 142
           N+L +K  L++  I  K     + TLN+  +KP+++  ++Y
Sbjct: 89  NILFRKKLLNAVKILSKI----DETLNSKPLKPVKIRTKVY 125


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -3

Query: 264 NVLIKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIY 142
           N+L +K  L++  I  K     + TLN+  +KP+++  ++Y
Sbjct: 85  NILFRKKLLNAVKILSKI----DETLNSKPLKPVKIRTKVY 121


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 239 SFPFLISTLRSFTLSW 286
           SF  L +T R+FT SW
Sbjct: 4   SFERLENTWRAFTASW 19


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 222 NLKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNT 103
           +L   ++R +TLN  +MKP   +     +  T+L + +NT
Sbjct: 54  SLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSL-RNT 92


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 143 IHETRPFCKYLKT 105
           +H+T+P C+ L T
Sbjct: 106 LHDTQPMCESLNT 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,736
Number of Sequences: 336
Number of extensions: 1459
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)