Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4b23
         (431 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         24   2.0  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         24   2.0  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         24   2.0  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         24   2.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   2.0  

>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -3

Query: 219 LKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEES 61
           + + R + NT++ +  + L  ARE+     T+      T+ P  D  ++ +E+
Sbjct: 109 IAQAREKLNTVSKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEA 161


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -3

Query: 219 LKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEES 61
           + + R + NT++ +  + L  ARE+     T+      T+ P  D  ++ +E+
Sbjct: 109 IAQAREKLNTVSKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEA 161


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -3

Query: 219 LKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEES 61
           + + R + NT++ +  + L  ARE+     T+      T+ P  D  ++ +E+
Sbjct: 109 IAQAREKLNTVSKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEA 161


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -3

Query: 219 LKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEES 61
           + + R + NT++ +  + L  ARE+     T+      T+ P  D  ++ +E+
Sbjct: 109 IAQAREKLNTVSKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEA 161


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -3

Query: 219  LKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRRLLEES 61
            + + R + NT++ +  + L  ARE+     T+      T+ P  D  ++ +E+
Sbjct: 1248 IAQAREKLNTVSKLTEQALTRAREVNDEALTLFAAVNRTAPPNIDIDKIKKEA 1300


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,447
Number of Sequences: 2352
Number of extensions: 6162
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)