Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4b23
         (431 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    28   4.7  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    28   4.7  
AL138971-4|CAB72282.1|  302|Drosophila melanogaster EG:BACR43E12...    28   6.2  
AE014298-470|AAF45830.1|  327|Drosophila melanogaster CG14418-PA...    28   6.2  
AE014296-3452|AAS65079.1| 1067|Drosophila melanogaster CG33287-P...    27   8.2  
AE014134-833|AAN10518.3| 1491|Drosophila melanogaster CG34126-PB...    27   8.2  

>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/68 (22%), Positives = 29/68 (42%)
 Frame = -3

Query: 288   RQLSVNDLNVLIKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISK 109
             ++LS  D  V+++ GK H   I     R        +K +  +   E+  R P  +++ +
Sbjct: 15029 KELSGMDHRVVVEDGKTHKLVIRNTNLRDSGTYTCKVKKQETQSTVEVLQRKPDFIKVLE 15088

Query: 108   NTSTPFKD 85
             +     KD
Sbjct: 15089 DYEVTEKD 15096


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/68 (22%), Positives = 29/68 (42%)
 Frame = -3

Query: 288   RQLSVNDLNVLIKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISK 109
             ++LS  D  V+++ GK H   I     R        +K +  +   E+  R P  +++ +
Sbjct: 16888 KELSGMDHRVVVEDGKTHKLVIRNTNLRDSGTYTCKVKKQETQSTVEVLQRKPDFIKVLE 16947

Query: 108   NTSTPFKD 85
             +     KD
Sbjct: 16948 DYEVTEKD 16955


>AL138971-4|CAB72282.1|  302|Drosophila melanogaster EG:BACR43E12.5
           protein.
          Length = 302

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 222 NLKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTS 100
           +L+R+R+RNN  NN+K +     R   + N    +++ N S
Sbjct: 218 SLRRRRNRNNNNNNLKRQQQRRRRPGNNNNNNRRRLNNNNS 258


>AE014298-470|AAF45830.1|  327|Drosophila melanogaster CG14418-PA
           protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 222 NLKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTS 100
           +L+R+R+RNN  NN+K +     R   + N    +++ N S
Sbjct: 243 SLRRRRNRNNNNNNLKRQQQRRRRPGNNNNNNRRRLNNNNS 283


>AE014296-3452|AAS65079.1| 1067|Drosophila melanogaster CG33287-PA
            protein.
          Length = 1067

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = -3

Query: 255  IKKGKLHSDTINLKRKRSRNNTLNNIKMKPLELAREIYSRNPTILQISKNTSTPFKDFRR 76
            +K  ++ SD +N+ + R  + T  N+     +  + IYS NP  L+ S   +  F   +R
Sbjct: 999  VKISEMCSDDVNVVKLRYED-TWRNVNNYN-DFGQAIYSLNPHTLEGSNKDAMLFVYLKR 1056

Query: 75   LLEE 64
            LL E
Sbjct: 1057 LLNE 1060


>AE014134-833|AAN10518.3| 1491|Drosophila melanogaster CG34126-PB
            protein.
          Length = 1491

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 192  TLNNIKMKPLELAREIYSRNPTILQISKNTSTP 94
            T +N+K  P+E+A E+Y   P+      N S+P
Sbjct: 1150 TTDNMKASPVEVASEVYEEQPS--SYKTNMSSP 1180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,252,688
Number of Sequences: 53049
Number of extensions: 291112
Number of successful extensions: 803
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)