Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc4b13
(724 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of act... 75 4e-16
AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity mod... 75 4e-16
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 24 1.1
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 24 1.1
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 24 1.1
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 23 2.5
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 23 2.5
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 22 4.4
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 22 5.8
>AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of
activity of ets genes protein.
Length = 108
Score = 75.4 bits (177), Expect = 4e-16
Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Frame = +2
Query: 245 EDDLPLDPRSWCRADVGAW---VSRRGGLPE----RFPMNGKALCLMSRDMFASRVPNKG 403
ED+LP DPR W R V W V+++ GLPE RF MNGKALCLMS MF SRVP G
Sbjct: 29 EDNLPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMSLGMFLSRVPLGG 88
Query: 404 FELHQDFRRRLAKAL 448
L++DF+ RL AL
Sbjct: 89 KLLYKDFQLRLCAAL 103
>AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity
modulator protein.
Length = 108
Score = 75.4 bits (177), Expect = 4e-16
Identities = 42/75 (56%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Frame = +2
Query: 245 EDDLPLDPRSWCRADVGAW---VSRRGGLPE----RFPMNGKALCLMSRDMFASRVPNKG 403
ED+LP DPR W R V W V+++ GLPE RF MNGKALCLMS MF SRVP G
Sbjct: 29 EDNLPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFLMNGKALCLMSLGMFLSRVPLGG 88
Query: 404 FELHQDFRRRLAKAL 448
L++DF+ RL AL
Sbjct: 89 KLLYKDFQLRLCAAL 103
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 24.2 bits (50), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 405 NPLFGTLEANMS---LDIRHRAFPFIGKRSGRPPRRDTHAPTSARHQDRGSNG 256
NP+ T E +S LD + FP I ++ P + TH RH + ++G
Sbjct: 74 NPIINT-ETGLSYTNLDYGNSNFPPINHQNYNEPYQRTHENMLLRHHEEVADG 125
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 24.2 bits (50), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 405 NPLFGTLEANMS---LDIRHRAFPFIGKRSGRPPRRDTHAPTSARHQDRGSNG 256
NP+ T E +S LD + FP I ++ P + TH RH + ++G
Sbjct: 74 NPIINT-ETGLSYTNLDYGNSNFPPINHQNYNEPYQRTHENMLLRHHEEVADG 125
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 24.2 bits (50), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 405 NPLFGTLEANMS---LDIRHRAFPFIGKRSGRPPRRDTHAPTSARHQDRGSNG 256
NP+ T E +S LD + FP I ++ P + TH RH + ++G
Sbjct: 74 NPIINT-ETGLSYTNLDYGNSNFPPINHQNYNEPYQRTHENMLLRHHEEVADG 125
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/56 (19%), Positives = 28/56 (50%)
Frame = +1
Query: 460 LHREDVQKLNPPECVSAVSS*CRRKRMWILAYTELILEAFIHNFRYSTILFFSYLS 627
++R+ + + + V C + ++ I A+ ++ +F+ YS++L Y+S
Sbjct: 243 INRQTLDTADVKTLTTVVEKECYKMKVTIDAFNDIFGWSFLLFTLYSSLLLLDYVS 298
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/56 (19%), Positives = 28/56 (50%)
Frame = +1
Query: 460 LHREDVQKLNPPECVSAVSS*CRRKRMWILAYTELILEAFIHNFRYSTILFFSYLS 627
++R+ + + + V C + ++ I A+ ++ +F+ YS++L Y+S
Sbjct: 169 INRQTLDTADVKTLTTVVEKECYKMKVTIDAFNDIFGWSFLLFTLYSSLLLLDYVS 224
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 488 IHQNAFPRYHLNVDGSEC 541
+HQN++ YHL + C
Sbjct: 79 MHQNSYTGYHLGSYAANC 96
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 489 STRMRFRGIILMSTEANVDTSLY 557
ST+ R I ++ E+ VDTS+Y
Sbjct: 262 STQSLSRWIKMVLAESGVDTSIY 284
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,242
Number of Sequences: 336
Number of extensions: 3629
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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