Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4b04
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    26   0.30 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.4  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   8.4  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +2

Query: 122 TPVANSPLSPVRQPPKSNIKPPTRISLPTRTFSANPLER 238
           TP  NSP  P  +   +N K P    L T  ++++  +R
Sbjct: 436 TPTENSPTKPYYKLKTANNKRPPSTELGTNIYTSSKRQR 474


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -2

Query: 546 SLMCCSVVFLYFTELLANLP---VMRISLLFI 460
           +L+ CSV F   +ELL +L    ++++S L I
Sbjct: 49  ALVYCSVTFFALSELLTDLATSILLKVSSLLI 80


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -3

Query: 569 NCKWCIANRSCAAP*SFCILQNC 501
           NCK     R C +  +FC    C
Sbjct: 325 NCKLGFMGRHCESKVNFCATSPC 347


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 274 DWFFTYNAAADAALQRI 224
           D FF Y+A+  A+L R+
Sbjct: 310 DQFFVYDASITASLGRV 326


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 274 DWFFTYNAAADAALQRI 224
           D FF Y+A+  A+L R+
Sbjct: 317 DQFFVYDASITASLGRV 333


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 467 SKDMRMTGKFASSSVKYKKTTEQHMSDSR 553
           ++D     K      +YKK  E+H++ SR
Sbjct: 97  ARDWERLSKKYDPQGQYKKRYEEHVATSR 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,068
Number of Sequences: 336
Number of extensions: 3256
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)