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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4b04
         (628 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15027| Best HMM Match : KIX (HMM E-Value=2)                         30   1.3  
SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57)                  30   1.8  
SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.8  
SB_36173| Best HMM Match : RVT_1 (HMM E-Value=1.2)                     30   1.8  
SB_47100| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)                     29   2.3  
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)              29   2.3  
SB_738| Best HMM Match : No HMM Matches (HMM E-Value=.)                29   2.3  
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_41665| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_17599| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_47544| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_18512| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)                 29   4.1  
SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)                29   4.1  
SB_24355| Best HMM Match : SAM_2 (HMM E-Value=3e-07)                   29   4.1  
SB_23500| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.1  
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)                 28   5.4  
SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.4  
SB_2838| Best HMM Match : DUF436 (HMM E-Value=3.5)                     28   5.4  
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40)                    28   7.1  
SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1)                   27   9.4  
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)            27   9.4  
SB_11362| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-32)               27   9.4  
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)                    27   9.4  

>SB_15027| Best HMM Match : KIX (HMM E-Value=2)
          Length = 547

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 326 ESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLK-FSTNYIMGYINSKDMRMTGKFAS 502
           E+L   SDK  +K+ +DL  +    + R + K +   F  +  + Y+        G+F  
Sbjct: 200 EALRQLSDKEVYKETKDLTQYITELVNRRVRKLSADGFIDDKTLDYLIINGKPRAGRFYL 259

Query: 503 SSVKYKKTTEQHMSDSRCTTCNYRFKD 583
               +KK        S C TC  +  +
Sbjct: 260 HPKIHKKGNPSRPVISGCNTCTEKISE 286


>SB_27527| Best HMM Match : MFAP1_C (HMM E-Value=0.57)
          Length = 818

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +2

Query: 98  KGRVKSLPTPVANSPLSPVRQP----PKSNIKPPTRISLPTR 211
           + R  SLP   A+SP +P   P    P SN  PP+ +SL  R
Sbjct: 676 RARSLSLPCTAASSPSTPASSPSPTPPLSNSLPPSTLSLMLR 717


>SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1554

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 326  ESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLK-FSTNYIMGYINSKDMRMTGKFAS 502
            E L   SDK  +K+ +DL  +    + R + K +   F  +  + Y+       TG+F  
Sbjct: 928  EVLRQLSDKEVYKETKDLTQYITELVNRRVRKLSADGFIDDKTLDYLIINGKPRTGRFYL 987

Query: 503  SSVKYKKTTEQHMSDSRCTTCNYRFKD 583
                +KK        S C TC  +  +
Sbjct: 988  LPKIHKKGNPGRPVISGCNTCTEKISE 1014


>SB_36173| Best HMM Match : RVT_1 (HMM E-Value=1.2)
          Length = 623

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 326 ESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLK-FSTNYIMGYINSKDMRMTGKFAS 502
           E+L   SDK  +K+ +DL  +    + R + K +   F  +  + YI        G+F  
Sbjct: 266 EALRQLSDKEVYKETKDLTQYITELVNRRVRKLSADGFIDDKTLDYIIINGKPRAGRFYL 325

Query: 503 SSVKYKKTTEQHMSDSRCTTCNYRFKD 583
               +KK        S C TC  +  +
Sbjct: 326 LPKIHKKGNPGRPVISGCNTCTEKISE 352


>SB_47100| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 167

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 598 PCARVVFESIIASGASRIAHVLLRSLFVFYRTACKFA 488
           PCA VV+  + AS A  ++  L   + + Y+T+ K +
Sbjct: 16  PCASVVYRLLFASNAMAVSRFLAIMVKILYKTSVKLS 52


>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
          Length = 480

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +2

Query: 80  APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTR-ISLPTRTFSANP 229
           AP   G  R    P P  N P  P+R P      PP +    P +  S+NP
Sbjct: 230 APPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNP 280


>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
          Length = 392

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +2

Query: 80  APKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTR-ISLPTRTFSANP 229
           AP   G  R    P P  N P  P+R P      PP +    P +  S+NP
Sbjct: 142 APPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPKNAPPPPKRGSSNP 192


>SB_738| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 108

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = +2

Query: 107 VKSLPT-PVANSPLSPVRQPPKSNI-KPPTR--ISLPTRTFSANP 229
           + S PT P+ + P SP+  PP + I  PPT   +S PT +  + P
Sbjct: 16  IMSPPTNPIMSPPTSPIMSPPTNPIMSPPTNPIMSPPTNSIMSAP 60


>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2346

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 8/40 (20%)
 Frame = +2

Query: 116  LPTPVANSPLSPVRQPPKSN--------IKPPTRISLPTR 211
            LP P+   PL P+R PP  +        + PP+RI LP++
Sbjct: 1340 LPLPLPRLPLPPLRLPPPHSRLPLPPPKLPPPSRIPLPSK 1379



 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 116  LPTPVANSPLSPVRQPPKSNIKPPTRIS 199
            LP P +  PL P + PP S I  P+++S
Sbjct: 1354 LPPPHSRLPLPPPKLPPPSRIPLPSKLS 1381


>SB_41665| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 657

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 326 ESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLK-FSTNYIMGYINSKDMRMTGKFAS 502
           E+L   SDK  +K+ +DL  +    + R + K +   F  +  + Y+        G+F  
Sbjct: 187 EALRQLSDKEVYKETKDLTQYITELVNRRVRKLSADGFIDDKTLDYLIINGKPRAGRFYL 246

Query: 503 SSVKYKKTTEQHMSDSRCTTCNYRFKD 583
               +KK        S C TC  +  +
Sbjct: 247 LPKIHKKGNPGRPVISGCNTCTEKISE 273


>SB_17599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 803

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 326 ESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLK-FSTNYIMGYINSKDMRMTGKFAS 502
           E L   SDK  +K+ +DL  +    + R + K +   F  +  + Y+        G+F  
Sbjct: 525 EVLRQLSDKEVYKETKDLTQYITELVNRRVRKLSADGFIDDKTLDYLIINGKPRVGRFYL 584

Query: 503 SSVKYKKTTEQHMSDSRCTTCNYRFKD 583
               +KK+       S C TC  +  +
Sbjct: 585 LPKIHKKSNPGRPVISGCNTCTEKISE 611


>SB_47544| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 585

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 326 ESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLK-FSTNYIMGYINSKDMRMTGKFAS 502
           E+L   SDK  +K+ +DL  +    + R + K +   F  +  + Y+        G+F  
Sbjct: 185 EALRQLSDKEVYKETKDLTQYITELVNRRVRKLSADGFIDDKTLDYLIINGKPRAGRFYL 244

Query: 503 SSVKYKKTTEQHMSDSRCTTCNYRFKD 583
               +KK        S C TC  +  +
Sbjct: 245 LPKIHKKGNPGRPVISGCNTCTEKISE 271


>SB_18512| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 551

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 326 ESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLK-FSTNYIMGYINSKDMRMTGKFAS 502
           E+L   SDK  +K+ +DL  +    + R + K +   F  +  + Y+        G+F  
Sbjct: 138 EALRQLSDKEVYKETKDLTQYITELVNRRVRKLSADGFIDDKTLDYLIINGKPRAGRFYL 197

Query: 503 SSVKYKKTTEQHMSDSRCTTCNYRFKD 583
               +KK        S C TC  +  +
Sbjct: 198 LPKIHKKGNPGRPVISGCNTCTEKISE 224


>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2143

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = +2

Query: 86  KTGGKGRVKSLPTPVANSPLSPVRQPPKSNI---KPPTRISLPTRTFSANPLER 238
           +T  + RV++   P A  P  P   PP SN+    PP  +  P +     P ++
Sbjct: 64  ETAARSRVETTDGPAAVIPPPPPPPPPASNVPAPPPPPPVMPPQKVIMRKPTKK 117


>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
          Length = 521

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +2

Query: 20  LSANQQVTMNRFFRENNIFDAPKTGGKG-RVKSLPTPVANSPLSPVRQPPKSNIKPPTRI 196
           L+A+++ T  +   + ++  +PKT  K  R+KSL T    SP    R  PK++ K   + 
Sbjct: 330 LNASRK-TSRKTSLKRSLKTSPKTSPKTMRMKSLKTSPKTSPEISPRTSPKTSSKTSPKT 388

Query: 197 SLPT 208
           SL T
Sbjct: 389 SLKT 392


>SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
          Length = 858

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 77  DAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPT 190
           D  +T G+  V   P      PL+P   PPK+  + P+
Sbjct: 300 DPGQTQGEEAVPGTPLQKPGGPLAPAESPPKTGTEEPS 337


>SB_24355| Best HMM Match : SAM_2 (HMM E-Value=3e-07)
          Length = 352

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 83  PKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPP 187
           P+T    + KS P P+    +SPV++P K    PP
Sbjct: 213 PRTNSSNKKKSAP-PLPKHVVSPVKRPNKVKAPPP 246


>SB_23500| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 586

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 326 ESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLK-FSTNYIMGYINSKDMRMTGKFAS 502
           E+L   SDK  +K+ +DL  +    + R + K +   F  +  + Y+        G+F  
Sbjct: 204 EALRQLSDKEVYKETKDLTQYITELVNRRVRKLSADGFIDDKTLDYLIINGKPRAGRFYL 263

Query: 503 SSVKYKKTTEQHMSDSRCTTCNYRFKD 583
               +KK        S C TC  +  +
Sbjct: 264 LPKIHKKGNPGRPVISGCNTCTEQISE 290


>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1212

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +2

Query: 119  PTPVANSPLSPVRQPP---KSNIKPPTRISLPTRTFSANPLE 235
            P+P  + P  P RQPP    S   PP R   P  T  A+P E
Sbjct: 1062 PSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAHPTE 1103


>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1300

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 83  PKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPP 187
           P+T    + KS P P+    +SPV++P K    PP
Sbjct: 213 PRTNSSNKKKSAP-PLPKHVVSPVKRPNKVKAPPP 246


>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
          Length = 519

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +2

Query: 119 PTPVANSPLSPVRQPPKSNIKPPTRI-SLPTRTFSANP 229
           P P    PL P+R+PP     PP  + S PT   +  P
Sbjct: 36  PIPHGPRPLPPLREPPTPAPTPPPALPSTPTLPLAPRP 73


>SB_49037| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2142

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 113  SLPTPVANSPLSPVRQPPKS 172
            SLP P+A+  L P  QPPK+
Sbjct: 1496 SLPQPIASKQLEPPPQPPKA 1515


>SB_2838| Best HMM Match : DUF436 (HMM E-Value=3.5)
          Length = 422

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 326 ESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLK-FSTNYIMGYINSKDMRMTGKFAS 502
           E+L   SDK  +K+ +DL  +    + R + K +   F  +  + Y+        G+F  
Sbjct: 188 EALRQLSDKEVYKETKDLTQYITELVNRRVRKLSADGFIDDKTLDYLIINGKPRAGRFYL 247

Query: 503 SSVKYKKTTEQHMSDSRCTTCNYRFKD 583
               +KK        S C TC  +  +
Sbjct: 248 LPKIHKKGYPGRPVISGCNTCTEKISE 274


>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2520

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 134  NSPLSPVRQPPKSNIKPPTRISLPTRTFSA 223
            ++PLSP   PPKS ++ P +     +  SA
Sbjct: 2161 SNPLSPFHDPPKSPVEEPMQFEQLAKVLSA 2190


>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 795

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 116 LPTPVANSPLSPVRQPPKSNIKPPTRISLP 205
           LPTP+A+S   P+  PP     PPT I +P
Sbjct: 689 LPTPIASSEPLPLPPPP-----PPTGIDIP 713


>SB_47268| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 722

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = +2

Query: 59  RENNIFDAPKTGGKGRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPT 208
           ++  +  +PKTG + +  +LP  V  +  SPV++P KS +KP  +++  T
Sbjct: 533 KKETVHWSPKTGVEEK-NTLP--VVPTWKSPVKKPTKSTVKPLPKLAKTT 579


>SB_10754| Best HMM Match : C2 (HMM E-Value=5.1e-40)
          Length = 2057

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 22/72 (30%), Positives = 32/72 (44%)
 Frame = +2

Query: 317  NKLESLPAYSDKLDFKQERDLRMHFMSDLERNIMKATLKFSTNYIMGYINSKDMRMTGKF 496
            N+ +S    S  L F  E DLRM   SDL  +     +K     +   ++SK  ++  K 
Sbjct: 998  NRRQSAGTKSKSLSFNNELDLRMRSTSDLSAH---PRIK-RHGSLANSLSSKAAKVKSKI 1053

Query: 497  ASSSVKYKKTTE 532
            +SS  K   T E
Sbjct: 1054 SSSFFKKVTTVE 1065


>SB_14830| Best HMM Match : NADH5_C (HMM E-Value=1.1)
          Length = 175

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 382 YAFYERFRTQHHESHAKIFHQLHYGLY 462
           Y  +  +   HH  H  + H LHY  Y
Sbjct: 94  YYHFHHYHYNHHHHHFHLHHHLHYQNY 120


>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
          Length = 496

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 101 GRVKSLPTPVANSPLSPVRQPPKSNIKPPTRISLPT 208
           GR   LP+P    P SP+R PP     PP+ I  PT
Sbjct: 253 GRDCYLPSPPRYPP-SPLRYPPIPPRYPPSLIRYPT 287


>SB_11362| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-32)
          Length = 382

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
 Frame = -1

Query: 568 IASGASRIAHVLLR--SLFVFYRTACKFARHAHIFT---VYITHNVIGGKF 431
           I +G  +  HV  +        R  CK   HAH+ T   VY  H V GG F
Sbjct: 165 IVNGGRKTTHVTCQWTGCMTRVRNHCKLREHAHVHTREKVYACH-VCGGMF 214


>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
          Length = 1348

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 119 PTPVANSPLSPVRQPPKSNIKPPTRISLPTR 211
           P P   S  S V++P    I PP R  LP R
Sbjct: 336 PVPAEPSAFSDVQRPSVYEIAPPPRPRLPAR 366


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,676,419
Number of Sequences: 59808
Number of extensions: 412749
Number of successful extensions: 1437
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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