Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc4a22
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   3.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   5.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   5.8  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   5.8  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   5.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   5.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.8  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +1

Query: 103 PNYFEEFVHRFNKNYSSEVEKLRRFKIFQH 192
           PN++ E   +FN ++  +++ L + K   H
Sbjct: 93  PNWWHELETKFNPHHEIKLQHLHQSKFNPH 122


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 103 PNYFEEFVHRFNKNYSSE 156
           PN +E F    N N+S+E
Sbjct: 140 PNQYENFQQYDNNNFSAE 157


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 103 PNYFEEFVHRFNKNYSSE 156
           PN +E F    N N+S+E
Sbjct: 140 PNQYENFQQYDNNNFSAE 157


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 103 PNYFEEFVH 129
           PN FEEFVH
Sbjct: 325 PNDFEEFVH 333


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 103 PNYFEEFVH 129
           PN FEEFVH
Sbjct: 327 PNDFEEFVH 335


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 103 PNYFEEFVH 129
           PN FEEFVH
Sbjct: 327 PNDFEEFVH 335


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 103 PNYFEEFVHRFNKNYSSE 156
           PN +E F    N N+S+E
Sbjct: 140 PNQYENFQQYDNNNFSAE 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,786
Number of Sequences: 336
Number of extensions: 3457
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)