Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3p06
(455 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 131 8e-30
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 98 9e-20
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 95 5e-19
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 86 4e-16
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 77 1e-13
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 77 2e-13
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 76 4e-13
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 64 1e-09
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 64 1e-09
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 64 2e-09
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 61 1e-08
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 59 5e-08
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 57 2e-07
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 56 5e-07
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 53 3e-06
UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia lam... 53 3e-06
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 51 1e-05
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 51 1e-05
UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta; n... 50 3e-05
UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;... 48 1e-04
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 48 1e-04
UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion; ... 46 4e-04
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 46 5e-04
UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;... 44 0.001
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 38 0.14
UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1; Tetr... 37 0.24
UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26; Archa... 34 1.3
UniRef50_Q8UDY7 Cluster: Cyclopropane-fatty-acyl-phospholipid sy... 33 3.8
UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10; Archa... 33 3.8
UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha; ... 32 5.1
UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;... 32 6.7
UniRef50_Q6MAN0 Cluster: Serine/threonine-protein kinase pknD; n... 32 6.7
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 131 bits (316), Expect = 8e-30
Identities = 68/112 (60%), Positives = 74/112 (66%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M +KAEL CVY++LILVDDDVAVTGEKI+TILKAA V+V PYWPGLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 203 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
TNIGSGV SDDDMGFGLFD
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 97.9 bits (233), Expect = 9e-20
Identities = 48/59 (81%), Positives = 50/59 (84%)
Frame = +2
Query: 47 CVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGSGV 223
C YSALIL DDDVAVT EKISTI A VD+ PYWPGLF KALEGINV+DLITNIGSGV
Sbjct: 19 CAYSALILFDDDVAVTDEKISTI--QANVDIEPYWPGLFTKALEGINVKDLITNIGSGV 75
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 95.5 bits (227), Expect = 5e-19
Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M S +EL C+YSALIL DD+V VT +KI+ ++KAA V+V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 203 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 85.8 bits (203), Expect = 4e-16
Identities = 47/56 (83%), Positives = 49/56 (87%)
Frame = +2
Query: 50 VYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 217
VYSALILVDD VAVT EKISTILKAA V+ PYW LFAKALEGINV+DLITNIGS
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAANVE--PYWRALFAKALEGINVKDLITNIGS 88
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 77.4 bits (182), Expect = 1e-13
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Frame = +2
Query: 26 VSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVD-VXPYWPGLFAKALEGINVRDLI 202
+SK+EL CVY+AL+L DDD+ VT +KI+TILKAA + V Y P LFA +L G NV+DL+
Sbjct: 1 MSKSELACVYAALMLADDDIDVTADKINTILKAANIKFVESYLPNLFATSLNGKNVKDLL 60
Query: 203 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDD----MGFGLFD 358
++GS SDDD +GFGLFD
Sbjct: 61 MSMGSPAPSAAVTSAVPTAASATSAAAEKPKEAVKEEKKVVSDDDSDESIGFGLFD 116
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 77.0 bits (181), Expect = 2e-13
Identities = 42/111 (37%), Positives = 54/111 (48%)
Frame = +2
Query: 26 VSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLIT 205
+S +EL C Y+ALIL DD + +T E IS ++K A V+V YWP LFAK E N+ DLI
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60
Query: 206 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
N+G+G S+DDM GLFD
Sbjct: 61 NVGAGGCGVARPVTTAAPTASQSVSIPEEKKNEMEVIKEESEDDMIIGLFD 111
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 75.8 bits (178), Expect = 4e-13
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Frame = +2
Query: 26 VSKAELXCVYSALILVDDDVAVTGEKISTILKAAAV-DVXPYWPGLFAKALEGINVRDLI 202
+S AEL Y+ALIL D+ + +T +K+ ++ AA V ++ P W LFAKALEG +V+DL+
Sbjct: 1 MSAAELASSYAALILADEGLEITADKLQALISAAKVPEIEPIWTSLFAKALEGKDVKDLL 60
Query: 203 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
N+GSG SDDDMGFGLFD
Sbjct: 61 LNVGSG--GGAAPAAGGAAAGGAAAVLDAPAEEKAEEEKEESDDDMGFGLFD 110
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 64.1 bits (149), Expect = 1e-09
Identities = 31/70 (44%), Positives = 47/70 (67%)
Frame = +2
Query: 11 SXLKMVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINV 190
S L + EL CVYS+L+L DD + VT + I ++KAA D+ P+ P LFA+AL+G ++
Sbjct: 7 SELTKEQREELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDMQPFTPMLFARALKGKDL 66
Query: 191 RDLITNIGSG 220
L++ +GSG
Sbjct: 67 GSLLSAVGSG 76
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 64.1 bits (149), Expect = 1e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +2
Query: 125 AAVDVXPYWPGLFAKALEGINVRDLITNIGSGV 223
A VD+ PYWP LFAKALEGINV+DLITNIGSGV
Sbjct: 6 ANVDIEPYWPALFAKALEGINVKDLITNIGSGV 38
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/60 (50%), Positives = 38/60 (63%)
Frame = +2
Query: 38 ELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 217
EL C Y+AL+L D V VT E I I+ AA V PY+PGLFA+AL NV D++ G+
Sbjct: 16 ELICSYAALVLSDGGVPVTSENIKKIISAAGGSVEPYFPGLFAQALSTTNVSDIVAGCGA 75
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAV-DVXPYWPGLFAKALEGINVRDL 199
M + E Y+ALIL DD +T EK+ +L AA + DV P W LFAKALEG +V+D+
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIEDVEPIWTTLFAKALEGKDVKDI 60
Query: 200 ITNIGS 217
+T + S
Sbjct: 61 LTEVAS 66
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 58.8 bits (136), Expect = 5e-08
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +2
Query: 47 CVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGI 184
C+YSA IL +D V V +KI+T +KAA ++V P+WPGLFAK+L +
Sbjct: 22 CIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNV 67
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 56.8 bits (131), Expect = 2e-07
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +2
Query: 32 KAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNI 211
K EL C Y+ALIL ++ +++T E I ++K + V PY P LF KAL+G ++ L++N+
Sbjct: 14 KQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKALKGKDIEGLLSNL 73
Query: 212 GSG 220
G
Sbjct: 74 SVG 76
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 55.6 bits (128), Expect = 5e-07
Identities = 34/102 (33%), Positives = 46/102 (45%)
Frame = +2
Query: 53 YSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGSGVXXX 232
Y+ALIL D +V +T EK+ ++ A V+V W LFAKALEG ++++ N +
Sbjct: 9 YAALILADAEVEITSEKLLALVTKANVEVEGIWADLFAKALEGKDLKEFFFNFSAA---- 64
Query: 233 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 65 PAAAAAGGAAGGGAAAEEAAEEEKEEEAKEESDDDMGFGLFD 106
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +2
Query: 35 AELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI-TNI 211
+E C Y+ALIL +D+ + K++ I+KAA + V P W +F KAL+G V DL+ N
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKALKGKKVGDLLHGNS 76
Query: 212 GS 217
GS
Sbjct: 77 GS 78
>UniRef50_Q7R476 Cluster: GLP_480_102976_103332; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_480_102976_103332 - Giardia
lamblia ATCC 50803
Length = 118
Score = 52.8 bits (121), Expect = 3e-06
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +2
Query: 38 ELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 217
E CV +A+IL D++ T + +I AA V V W LFA LEG NV++L+T +GS
Sbjct: 5 ETACVLAAIILADENQEPTAANLKSICDAAGVKVDSIWFTLFANYLEGKNVKELLTTLGS 64
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +2
Query: 35 AELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIG 214
AEL CVY+ALIL D + + + ++ ++ A+ + + +W L+A + NV DLI N+
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGLKLDQFWVNLYADYFKKANVADLIKNVS 62
Query: 215 SG 220
G
Sbjct: 63 LG 64
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 50.8 bits (116), Expect = 1e-05
Identities = 32/111 (28%), Positives = 46/111 (41%)
Frame = +2
Query: 26 VSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLIT 205
+S L C Y+AL+L D + + E I+ +KAA V++ P P +FA+ LE +V L+
Sbjct: 1 MSAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEMRPTLPIIFARFLEKKSVETLMA 60
Query: 206 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
+ DDDMGFGLFD
Sbjct: 61 AAAAQAPTAASAPSPAAGAASAAAAGGKVEDKKKDEPEEEGDDDMGFGLFD 111
>UniRef50_P10622 Cluster: 60S acidic ribosomal protein P1-beta;
n=21; Ascomycota|Rep: 60S acidic ribosomal protein
P1-beta - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 49.6 bits (113), Expect = 3e-05
Identities = 29/102 (28%), Positives = 46/102 (45%)
Frame = +2
Query: 53 YSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGSGVXXX 232
++A IL D + +T + + TI KAA +V W ++AKALEG +++++++ +
Sbjct: 8 FAAFILADAGLEITSDNLLTITKAAGANVDNVWADVYAKALEGKDLKEILSGFHNA---G 64
Query: 233 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 65 PVAGAGAASGAAAAGGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_UPI0000499C26 Cluster: 60S acidic ribosomal protein P1;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P1 - Entamoeba histolytica HM-1:IMSS
Length = 106
Score = 48.0 bits (109), Expect = 1e-04
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +2
Query: 38 ELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 217
EL +AL++ + +T E I+T+L A + V +WP + AKAL N+ DLI + GS
Sbjct: 9 ELAVALAALLIHEAGKEITAEHINTVLHHANIKVEGFWPIIMAKALTNANIEDLIMDAGS 68
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 48.0 bits (109), Expect = 1e-04
Identities = 32/112 (28%), Positives = 45/112 (40%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M SK +L C Y+ALIL D + + + KAA VDV FA L+ +++ D++
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDVSKGMASAFASILKNVDINDVL 59
Query: 203 TNIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
+ + G DDDMGFGLFD
Sbjct: 60 SKVSFG--GVAPAAGGATAAPAAAAAAAAPAAAAAKKEEEEEDDDMGFGLFD 109
>UniRef50_Q7XBP6 Cluster: Ubiquitin/ribosomal protein P1 fusion;
n=3; Chlorarachniophyceae|Rep: Ubiquitin/ribosomal
protein P1 fusion - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 221
Score = 46.0 bits (104), Expect = 4e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +2
Query: 32 KAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEG 181
K EL +Y +IL + +T E I+ +L A+ ++V PYWP +FA+ ++G
Sbjct: 119 KQELAIMYCGMILNEVKADITEENINKLLSASKIEVAPYWPKMFAEIVKG 168
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 45.6 bits (103), Expect = 5e-04
Identities = 32/106 (30%), Positives = 43/106 (40%)
Frame = +2
Query: 41 LXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGSG 220
L C Y+AL+L D + + E I+ +KAA V V P P +FA+ LE +V L+ +
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSVRPTMPIIFARFLEKKSVEALM----AA 61
Query: 221 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
DDDMGFGLFD
Sbjct: 62 AATQAPTATSAAAAPAAGEASGKAEEKKKEEPEEEGDDDMGFGLFD 107
>UniRef50_Q4QFE2 Cluster: 60S acidic ribosomal protein, putative;
n=8; Eukaryota|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 108
Score = 44.4 bits (100), Expect = 0.001
Identities = 32/111 (28%), Positives = 45/111 (40%)
Frame = +2
Query: 26 VSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLIT 205
++ A+L C Y+ALIL + I + KAA V+V FA AL +NV +++
Sbjct: 1 MTTAQLACTYAALILSASG-KTDADSICAVTKAAGVEVSHGMAAAFANALAAVNVNEVLG 59
Query: 206 NIGSGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
+I G +DDDMGFGLFD
Sbjct: 60 SISFG--GAAAGGAAAPAAAAAASGAAPAAAAAKEEPEEDADDDMGFGLFD 108
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 37.5 bits (83), Expect = 0.14
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 38 ELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYW 151
EL CVY+ALIL D D +T + + I+ A+ + +W
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGLQTDKFW 41
>UniRef50_Q22XR4 Cluster: 60s Acidic ribosomal protein; n=1;
Tetrahymena thermophila SB210|Rep: 60s Acidic ribosomal
protein - Tetrahymena thermophila SB210
Length = 271
Score = 36.7 bits (81), Expect = 0.24
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 47 CVYSALILVDDDVAVTGEKISTIL-KAAAVDVXPYWPGLFAKALEGINVRDLITNIGS 217
C Y+ L+L DD A+T + I+ +L KA +V Y P L+ + + I N GS
Sbjct: 9 CTYAVLLLSDDGQAITVDNINKVLTKAKVQNVEKYLPKLYVSNITPAVIASTIANGGS 66
>UniRef50_O28780 Cluster: 50S ribosomal protein L12P; n=26;
Archaea|Rep: 50S ribosomal protein L12P - Archaeoglobus
fulgidus
Length = 106
Score = 34.3 bits (75), Expect = 1.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 50 VYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
VY+AL+L +T + + +L+AA V+V ALEG+N+ + I
Sbjct: 4 VYAALLLHSAGKEITEDNVKAVLEAAGVEVDEARVKALVAALEGVNIDEAI 54
>UniRef50_Q8UDY7 Cluster: Cyclopropane-fatty-acyl-phospholipid
synthase; n=1; Agrobacterium tumefaciens str. C58|Rep:
Cyclopropane-fatty-acyl-phospholipid synthase -
Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Length = 410
Score = 32.7 bits (71), Expect = 3.8
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 202 DQVTDIDAFQGFGEQTWPIWLYIYSRRFQDGGNFLTSYGNIIINQDESRVNT 47
D + ++ F+ GE WP + + R + GG + II+ DESR +T
Sbjct: 261 DNIVSVEMFEAVGESYWPSYFEMLKRCLKPGGRAVLQ----IISIDESRFDT 308
>UniRef50_P15772 Cluster: 50S ribosomal protein L12P; n=10;
Archaea|Rep: 50S ribosomal protein L12P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 115
Score = 32.7 bits (71), Expect = 3.8
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 50 VYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
VY+ALIL + D + + ++ +L AA VDV ALE +++ + +
Sbjct: 4 VYAALILNEADEEINEDNLTDVLDAAGVDVEESRVKALVAALEDVDIEEAV 54
>UniRef50_P05319 Cluster: 60S acidic ribosomal protein P2-alpha;
n=19; Eukaryota|Rep: 60S acidic ribosomal protein
P2-alpha - Saccharomyces cerevisiae (Baker's yeast)
Length = 106
Score = 32.3 bits (70), Expect = 5.1
Identities = 23/86 (26%), Positives = 31/86 (36%)
Frame = +2
Query: 101 KISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXXXXX 280
KI IL++ +++ ALEG +V +LIT +
Sbjct: 21 KIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPAAGPASAGGAAAASG 80
Query: 281 XXXXXXXXXXXXXXXSDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 81 DAAAEEEKEEEAAEESDDDMGFGLFD 106
>UniRef50_Q39NV6 Cluster: Transcriptional regulator, AraC family;
n=16; Burkholderiaceae|Rep: Transcriptional regulator,
AraC family - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 352
Score = 31.9 bits (69), Expect = 6.7
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 65 ILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLITNI 211
+L + VT E+ ST+ + A+D+ PG+F++ L G ++ L ++
Sbjct: 58 LLGEPHARVTEEQFSTLYRTLAIDLDDEMPGIFSRPLRGGTLKYLCLSL 106
>UniRef50_Q6MAN0 Cluster: Serine/threonine-protein kinase pknD; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Serine/threonine-protein kinase pknD - Protochlamydia
amoebophila (strain UWE25)
Length = 982
Score = 31.9 bits (69), Expect = 6.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 148 IWLYIYSRRFQDGGNFLTSYGNIIINQDES 59
+W Y+ + +QD GN L +Y +N+D S
Sbjct: 858 VWAYLLDKNWQDAGNLLYTYSVETLNKDSS 887
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,546,380
Number of Sequences: 1657284
Number of extensions: 4811440
Number of successful extensions: 12722
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 12474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12707
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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