Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3p06
(455 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 95 8e-20
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 95 8e-20
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 95 8e-20
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 95 8e-20
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 95 1e-19
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 93 4e-19
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 89 9e-18
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 29 10.0
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 29 10.0
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 29 10.0
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 29 10.0
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 29 10.0
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 29 10.0
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 29 10.0
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 29 10.0
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 95.5 bits (227), Expect = 8e-20
Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M S +EL C+YSALIL DD+V VT +KI+ ++KAA V+V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 203 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 95.5 bits (227), Expect = 8e-20
Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M S +EL C+YSALIL DD+V VT +KI+ ++KAA V+V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 203 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 95.5 bits (227), Expect = 8e-20
Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M S +EL C+YSALIL DD+V VT +KI+ ++KAA V+V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 203 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 95.5 bits (227), Expect = 8e-20
Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M S +EL C+YSALIL DD+V VT +KI+ ++KAA V+V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 203 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 95.1 bits (226), Expect = 1e-19
Identities = 49/114 (42%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M S +EL C+YSAL+L DD+V VT +KI+ ++KAA V+V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 203 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
N+G+G SDDDMGFGLFD
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 93.1 bits (221), Expect = 4e-19
Identities = 49/113 (43%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M S +EL C+YSALIL DD+V VT +KI+ ++KAA V+V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 203 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLF 355
N+G+G SDDDMGFGLF
Sbjct: 61 CNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLF 113
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 88.6 bits (210), Expect = 9e-18
Identities = 48/114 (42%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Frame = +2
Query: 23 MVSKAELXCVYSALILVDDDVAVTGEKISTILKAAAVDVXPYWPGLFAKALEGINVRDLI 202
M S +EL +YSALIL DD+V VT +KI+ ++KAA V+V P+WPGLFAKAL +N+ LI
Sbjct: 1 MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 203 TNIGSG--VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 358
++G+G SDDDMGFGLFD
Sbjct: 61 CDVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 326 SDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 326 SDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 326 SDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 326 SDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 326 SDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 326 SDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 326 SDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 28.7 bits (61), Expect = 10.0
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 326 SDDDMGFGLFD 358
SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,601,520
Number of Sequences: 237096
Number of extensions: 720180
Number of successful extensions: 1184
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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