Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3p02
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:...    36   0.73 
UniRef50_UPI0000DB7A7F Cluster: PREDICTED: similar to F02C12.1, ...    35   2.2  
UniRef50_Q98QZ8 Cluster: Putative uncharacterized protein MYPU_2...    34   3.9  
UniRef50_A0NRM9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q4RQ32 Cluster: Chromosome 17 SCAF15006, whole genome s...    33   9.0  
UniRef50_Q4QDE4 Cluster: SNARE protein, putative; n=3; Leishmani...    33   9.0  
UniRef50_A3M0M4 Cluster: Predicted protein; n=1; Pichia stipitis...    33   9.0  

>UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:
            Mucin-16 - Homo sapiens (Human)
          Length = 22152

 Score = 36.3 bits (80), Expect = 0.73
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +2

Query: 89   VTSTMDEHTSTDTVQESSNPTLHVEAPTDCDFNLTPVQIQQQYFEN 226
            VTST+ EH+++  V  +S PT  +   TD D NL PV    Q   N
Sbjct: 6238 VTSTLQEHSTSSLVSVTSVPTPTLAKITDMDTNLEPVTRSPQNLRN 6283


>UniRef50_UPI0000DB7A7F Cluster: PREDICTED: similar to F02C12.1,
           partial; n=1; Apis mellifera|Rep: PREDICTED: similar to
           F02C12.1, partial - Apis mellifera
          Length = 321

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
 Frame = +2

Query: 164 APTDCDFN--LTPVQIQQQ-YFENLGDCNWIRYEKCNRNHLLQNLAFGLFGPPITEGE-- 328
           A  D D+N  L   ++QQQ Y+E L +  W +Y      +L QN+ + LFG P    E  
Sbjct: 4   ADQDTDWNEMLKIAKLQQQEYYELLPE--WTKYTADEYKYLRQNIGYALFGVPSESEENK 61

Query: 329 --LIEKEEM-------NAINLQGYTSRQKEKVDLVYAKICEQGNT 436
              IE E++       +      Y    ++ +++VY +IC  G T
Sbjct: 62  DVYIEDEKIGKNKQIKDITETLCYKPDAEKIINIVYEQICTHGAT 106


>UniRef50_Q98QZ8 Cluster: Putative uncharacterized protein
           MYPU_2120; n=1; Mycoplasma pulmonis|Rep: Putative
           uncharacterized protein MYPU_2120 - Mycoplasma pulmonis
          Length = 1377

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +2

Query: 248 RYEKCNRNHLLQNLAFGLFGPPITEGELIEKEEMNAINLQGYTSRQKEKVDLVYAKICEQ 427
           RYEK N+ HL+   A+ LF  P +E +  + +++         +    K ++  +   E 
Sbjct: 97  RYEKDNKKHLIALTAYSLFSKPKSEVQATKNQKLRFFEFSEKYNTYVFKKEVTISDSIED 156

Query: 428 GNTNN 442
            N NN
Sbjct: 157 ENNNN 161


>UniRef50_A0NRM9 Cluster: Putative uncharacterized protein; n=1;
           Stappia aggregata IAM 12614|Rep: Putative
           uncharacterized protein - Stappia aggregata IAM 12614
          Length = 597

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +2

Query: 146 PTLHVEAPTDCDFNLTPVQIQQQYFENLGD 235
           P + VEA  D D NLTPV  +QQ F  L D
Sbjct: 556 PNIRVEALPDADHNLTPVAARQQMFALLTD 585


>UniRef50_Q4RQ32 Cluster: Chromosome 17 SCAF15006, whole genome
           shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 17
           SCAF15006, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 852

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +2

Query: 41  NIYLLLIALFLKVKQKVTSTMDEHTSTDTVQESSNPTLHVEAPTDCDFNLTPVQIQQQYF 220
           NI L L+  FL     + STMD+   T  V+  +NP +    PT   ++ + +     Y+
Sbjct: 430 NIILFLLLFFLTTPAIIISTMDKFNVTKPVEYLNNPIITQFFPTLLLWSFSALLPTIVYY 489

Query: 221 ENLGDCNWIR 250
               + +W R
Sbjct: 490 SAFFEAHWTR 499


>UniRef50_Q4QDE4 Cluster: SNARE protein, putative; n=3;
           Leishmania|Rep: SNARE protein, putative - Leishmania
           major
          Length = 235

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 74  KVKQKVTSTMDEHTSTDTVQESSNPTLHVEAPTDCDFNLTPVQ 202
           +V+     TM+    T TV  SS  TLH  A   C  N+TP+Q
Sbjct: 53  RVRPLAQGTMNSFAGT-TVVSSSGATLHARAGAGCSQNVTPLQ 94


>UniRef50_A3M0M4 Cluster: Predicted protein; n=1; Pichia
           stipitis|Rep: Predicted protein - Pichia stipitis
           (Yeast)
          Length = 836

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +2

Query: 263 NRNHLLQNLAFGLFGPPITEGELIEKEEMNAIN--LQGYTSRQKEKVDLVYAKICE 424
           NR H +  L +   G P  EG L +K  ++AI+  L  Y+S  K    ++  K+CE
Sbjct: 325 NRTHFIMYLLYQKKGTPFLEGLLSDKVFLDAISNRLHSYSSNVKSLGVVLADKVCE 380


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,659,930
Number of Sequences: 1657284
Number of extensions: 11949038
Number of successful extensions: 26636
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26628
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)