Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3o24
(747 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 193 3e-48
UniRef50_P41477 Cluster: Late expression factor 4; n=13; Nucleop... 179 6e-44
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 140 3e-32
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 138 2e-31
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 133 4e-30
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 130 3e-29
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 109 9e-23
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir... 81 3e-14
UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostel... 78 2e-13
UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep: Vp3... 75 2e-12
UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep: L... 75 2e-12
UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -... 71 2e-11
UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea o... 71 4e-11
UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2; Nucleopo... 70 5e-11
UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantri... 67 5e-10
UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep: L... 66 9e-10
UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep: L... 60 6e-08
UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3; Nuc... 56 9e-07
UniRef50_Q8JRX2 Cluster: Late expression factor 4; n=1; Phthorim... 47 4e-04
UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF... 46 7e-04
UniRef50_Q6QXM5 Cluster: ORF85; n=1; Agrotis segetum granuloviru... 46 0.001
UniRef50_Q9DVV5 Cluster: PxORF78 peptide; n=1; Plutella xylostel... 45 0.002
UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californ... 45 0.002
UniRef50_Q7T9T5 Cluster: Lef-4; n=1; Adoxophyes orana granulovir... 43 0.007
UniRef50_Q9PYT3 Cluster: ORF110; n=3; Granulovirus|Rep: ORF110 -... 37 0.61
UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|R... 34 4.3
UniRef50_Q239Z2 Cluster: Calpain family cysteine protease contai... 33 7.5
UniRef50_P43961 Cluster: Uncharacterized protein HI0178 precurso... 33 7.5
UniRef50_Q06VK4 Cluster: Putative uncharacterized protein; n=1; ... 27 7.8
UniRef50_Q97MB6 Cluster: Cytosine/guanine deaminase related prot... 33 9.9
UniRef50_Q8I326 Cluster: Putative uncharacterized protein PFI061... 33 9.9
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 193 bits (471), Expect = 3e-48
Identities = 90/136 (66%), Positives = 107/136 (78%)
Frame = +1
Query: 334 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 513
MAL+ G++ R+ N CIF +I FD+C+TY+SPCS DA DDGWFIC+ HL RFKMS
Sbjct: 1 MALVSPGVSSRRS-TNHCIFGAIEPFDSCVTYRSPCSSDASVDDGWFICDYHLKLRFKMS 59
Query: 514 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 693
KMVLPI+DEDDNQ+K TIARHLVG+KERG+KRIL+P+ NY VFNL MM AEQLIFHL
Sbjct: 60 KMVLPIYDEDDNQYKRTIARHLVGHKERGVKRILVPTRANYMTVFNLPGMMLAEQLIFHL 119
Query: 694 IYNNEEAVNVICDNLK 741
IY+N VN IC +LK
Sbjct: 120 IYDNRLEVNRICASLK 135
>UniRef50_P41477 Cluster: Late expression factor 4; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 464
Score = 179 bits (436), Expect = 6e-44
Identities = 85/105 (80%), Positives = 93/105 (88%)
Frame = -1
Query: 315 MDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC 136
MD+G+F+IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC
Sbjct: 1 MDYGDFVIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSAC 60
Query: 135 NNIISSVKKTNSKHKKFVYWPKDTXRVGAVGVETRAKNINPPFNS 1
NNIISSVKKTNSKHKKFVYWPKDT + + V +K I P+ +
Sbjct: 61 NNIISSVKKTNSKHKKFVYWPKDTNALVPL-VWRESKEIKLPYKT 104
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 140 bits (339), Expect = 3e-32
Identities = 64/137 (46%), Positives = 91/137 (66%)
Frame = +1
Query: 334 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 513
MAL+ ++ ++R N C+F ++ FD C Y SPCSPD+ ++DGWFIC+ H RFK+
Sbjct: 1 MALVSGALSTNRLR-NYCVFGAVQPFDNCRAYGSPCSPDSTNNDGWFICDYHSSIRFKIE 59
Query: 514 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 693
KMVLPI D + N + T+ + LV +K G R+LIP+ NY+ V NLNSM AEQL+ H+
Sbjct: 60 KMVLPIPDAEGNIYNRTVGKSLVNHKTLGAARVLIPTRDNYKTVLNLNSMSLAEQLVTHM 119
Query: 694 IYNNEEAVNVICDNLKY 744
IY+N EA +C L++
Sbjct: 120 IYDNVEAQGAVCKALQH 136
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 138 bits (333), Expect = 2e-31
Identities = 68/136 (50%), Positives = 87/136 (63%)
Frame = +1
Query: 334 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 513
MAL+ GMA ++ N CIF S+ FDAC Y+SPCS DA ++DGW IC+ HL RFKM
Sbjct: 1 MALVVSGMATGRIN-NYCIFGSVQPFDACGPYRSPCSDDAKNNDGWLICDYHLSTRFKME 59
Query: 514 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 693
KMVLPI D D T+AR LV +K G +RIL+P+ NY V N+ ++ AEQ IFH+
Sbjct: 60 KMVLPIPDADGTALNRTLARSLVNHKAIGDERILVPTKRNYMSVLNILALQLAEQYIFHI 119
Query: 694 IYNNEEAVNVICDNLK 741
IY N+ IC L+
Sbjct: 120 IYENDVERERICQMLE 135
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 133 bits (322), Expect = 4e-30
Identities = 66/137 (48%), Positives = 84/137 (61%)
Frame = +1
Query: 334 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 513
MAL P G Q + N CIF +I FD C TY SPCS DA +DGWFIC HL RF+M
Sbjct: 1 MALTPYGS--NQPQSNNCIFGAIRPFDTCRTYSSPCSNDASQEDGWFICEYHLSIRFRME 58
Query: 514 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 693
KMVLPI D + + ++ + L+ E R+LIP+ TNY++V L SM EQLIFH+
Sbjct: 59 KMVLPIPDAEGTIYNRSVGKSLISGTES--NRVLIPTKTNYEDVLKLPSMSLPEQLIFHM 116
Query: 694 IYNNEEAVNVICDNLKY 744
IY+ + N IC L+Y
Sbjct: 117 IYDEPDKQNEICKLLQY 133
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 130 bits (315), Expect = 3e-29
Identities = 63/138 (45%), Positives = 81/138 (58%)
Frame = +1
Query: 334 MALMPVGMAPRQMRVNRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS 513
MAL+P G+ + N CIFA + SFDAC Y + CS DA +DGW+IC H FKM
Sbjct: 1 MALVPAGLTSSRSNSN-CIFAGVQSFDACYRYPNECSKDADSNDGWYICEYHASVHFKME 59
Query: 514 KMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHL 693
KM L I D D+ T+ R LV + E G RIL+P+ NY+ V N+ + AE LI H+
Sbjct: 60 KMSLAIPDADNKVLFRTVGRSLVKHTEEGTARILVPNKNNYESVLNVQDLPLAEALIIHM 119
Query: 694 IYNNEEAVNVICDNLKYT 747
IY N E IC+ LK+T
Sbjct: 120 IYENLEKQKEICERLKFT 137
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 109 bits (261), Expect = 9e-23
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
Frame = +1
Query: 334 MALMPVGMAPRQMRVNRCIFASI--VSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFK 507
MAL+ G A +M+ N CIF + + F+ C Y+SPCS DA +DG F+C HL + FK
Sbjct: 1 MALVSGGNANSRMK-NYCIFQGVRPIEFNQCSNYRSPCSDDASQNDGVFMCQYHLSRFFK 59
Query: 508 MSKMVLPIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 687
+ K + I D + + + LV + R RILIP+ NYQ V N++ + AE+L+
Sbjct: 60 IEKTSIAIPDGTGQKLYRIVGKSLVSHNARANDRILIPTQENYQAVMNVSMLPPAERLVL 119
Query: 688 HLIYNNEEAVNVICDNLK 741
HLIYNN A IC+ L+
Sbjct: 120 HLIYNNRTAAAEICNQLR 137
>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
granulovirus|Rep: ORF086 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 292
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Frame = +1
Query: 379 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDNQ 552
N CIF + F C Y+ PC Y+DDG FIC HL K FKM KMV+ I +
Sbjct: 12 NLCIFQGVQPPEFLNCRPYEPPCI-QPYNDDGTFICQYHLAKYFKMEKMVVRIGSGVGPE 70
Query: 553 FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICD 732
F M I + L+ +RI+IP +N+ + +M E+ +F+ IY ++ + +C
Sbjct: 71 FDMLIGKTLIQQNTEDARRIMIPLPSNFLTYLQVENMSATEKFVFYSIYERQDLIAELCR 130
Query: 733 NL 738
L
Sbjct: 131 GL 132
>UniRef50_Q9DVV4 Cluster: PxORF79 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF79 peptide - Plutella xylostella
granulovirus
Length = 320
Score = 78.2 bits (184), Expect = 2e-13
Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Frame = +1
Query: 355 MAPRQMRV-NRCIFASIVSFDA--CITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVL 525
M+ RQ RV N CIF ++ ++ C CS DA +DDG FICN HL F + KM L
Sbjct: 2 MSLRQNRVYNNCIFQAVSYSNSSLCADPVLHCSKDASNDDGTFICNHHLSMYFPLEKMTL 61
Query: 526 PIFDEDDNQFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNN 705
I FK+ I + LV ++ + I+IPS NY + +N+M AE+ I + IY
Sbjct: 62 EIPSGTGTSFKLLIGKSLV--QQDATRNIIIPSKANYIDYLRVNNMSPAEKFIMYSIYGE 119
Query: 706 EEA-----VNVICDNLK 741
+ +C++L+
Sbjct: 120 SATEPTGLITQLCESLR 136
>UniRef50_Q7T9T4 Cluster: Vp39-capsid; n=5; Granulovirus|Rep:
Vp39-capsid - Adoxophyes orana granulovirus (AoGV)
Length = 291
Score = 74.5 bits (175), Expect = 2e-12
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Frame = +1
Query: 349 VGMAPRQMRVNRCIFASIVS----FDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM 510
+ + P ++ N CIF +V + C Y SPCSPDA + DG FICN HL K FK+
Sbjct: 4 INVGPCELN-NYCIFQGVVGMMPDYYRCENYSSPCSPDASNSNLDGTFICNYHLNKYFKI 62
Query: 511 SKMVLPIFDEDDNQ-FKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIF 687
K I DN+ FKM + + L+ + + + +++ +S E++I
Sbjct: 63 LKSSFRIPSGKDNKSFKMLVGQSLLQQTDNDTNKNKVLIPLDHELYLKTSSRNSVERMII 122
Query: 688 HLIYNNEEAVNVICDNL 738
+ IYN++E + +CD L
Sbjct: 123 YTIYNDKEKIKDLCDIL 139
>UniRef50_Q0N422 Cluster: LEF-4; n=8; Nucleopolyhedrovirus|Rep:
LEF-4 - Clanis bilineata nucleopolyhedrosis virus
Length = 497
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = -1
Query: 294 IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNI-ISS 118
+E+EISYSINFSQDLLY +LN+YI N+ L ++Y D D N RTR+ + S N I I S
Sbjct: 19 LEREISYSINFSQDLLYILLNAYISNNFVLHEKYTDFVDVNDVRTRLSVDSNTNKIKIVS 78
Query: 117 VKKTNSKHKKFVY 79
KT ++FVY
Sbjct: 79 TLKTPQSLRRFVY 91
>UniRef50_Q9PYT2 Cluster: ORF111; n=4; Granulovirus|Rep: ORF111 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 329
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +1
Query: 379 NRCIFASIV--SFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMSKMVLPIFDEDDN- 549
N CIF + F C Y PCS D + DG F+C+ HL + FK+ K V I +N
Sbjct: 16 NLCIFQGVQPPEFMNCGIYTPPCSDDCVNKDGTFVCSYHLARYFKLKKEVFEIPSGVNNT 75
Query: 550 QFKMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAV 717
FK + L+ RI IP+ NY N+ +M E+ +F+ IY+ + V
Sbjct: 76 SFKYLVGVSLIQQNVPTANRITIPAKDNYYSYLNVANMSSMEKYVFYSIYDEPDTV 131
>UniRef50_Q8JRX1 Cluster: Capsid protein VP39; n=1; Phthorimaea
operculella granulovirus|Rep: Capsid protein VP39 -
Phthorimaea operculella granulovirus
Length = 293
Score = 70.5 bits (165), Expect = 4e-11
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Frame = +1
Query: 379 NRCIFASI-VSFDACITYKSPCSPDAYHD--DGWFICNSHLIKRFKM--SKMVLPIFDED 543
N CIF + FD C Y CS DA + DG FICN HL K F++ SK +P D
Sbjct: 13 NYCIFQGVNYQFD-CDGYTRQCSEDARYSQLDGTFICNFHLGKYFRILKSKFEIPSGGVD 71
Query: 544 DNQFKMTIARHLVGNKERGI---KRILIP-SATNYQEVFNLNSMMQAEQLIFHLIYNNEE 711
+ FKM + + LV E+ KR+LIP S + + + S+M E+ +F+ IY +E+
Sbjct: 72 NRSFKMLVGQSLVPYAEKSTDPGKRLLIPMSVDDVRLAVSSRSLM--ERFVFYTIYEDED 129
Query: 712 AVNVICDNL 738
+ ICD +
Sbjct: 130 KLKSICDEI 138
>UniRef50_A0EYX2 Cluster: Late expression factor 4; n=2;
Nucleopolyhedrovirus|Rep: Late expression factor 4 -
Ecotropis obliqua NPV
Length = 471
Score = 70.1 bits (164), Expect = 5e-11
Identities = 39/75 (52%), Positives = 46/75 (61%)
Frame = -1
Query: 294 IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSV 115
IEKEISYS+N SQDLLYKIL +YI ++L Q+Y D DEN RTRI I SV
Sbjct: 6 IEKEISYSVNVSQDLLYKILTTYISKKFTLTQEYIDCVDENNVRTRIVADQ-----IKSV 60
Query: 114 KKTNSKHKKFVYWPK 70
K +KFV+ K
Sbjct: 61 FKIPQSLQKFVHVDK 75
>UniRef50_Q9YMN4 Cluster: Late expression factor 4; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 4 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 485
Score = 66.9 bits (156), Expect = 5e-10
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = -1
Query: 306 GNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNI 127
G IEKEISYSIN SQDLL+ IL SYI N+ L+ +YF+ +EN R+R+
Sbjct: 19 GVVTIEKEISYSINLSQDLLFIILESYISKNFVLSCEYFECVNENDVRSRL----TGGRF 74
Query: 126 ISSVKKTNSKHKKFVY 79
+S++K+T S +KFVY
Sbjct: 75 VSTIKQTESL-RKFVY 89
>UniRef50_Q99GW9 Cluster: Lef-4; n=3; Nucleopolyhedrovirus|Rep:
Lef-4 - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 461
Score = 66.1 bits (154), Expect = 9e-10
Identities = 37/80 (46%), Positives = 45/80 (56%)
Frame = -1
Query: 294 IEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSV 115
+EKEISY+IN SQDLLY I NSYIV + QY DL D N RTR + SV
Sbjct: 3 LEKEISYTINLSQDLLYIIFNSYIVKHMDYRTQYCDLIDCNDVRTRFE-----RGTVQSV 57
Query: 114 KKTNSKHKKFVYWPKDTXRV 55
K N K+F ++ DT +
Sbjct: 58 HKKNVFMKRFAHYVNDTATI 77
>UniRef50_Q9DHD8 Cluster: LEF-4; n=3; Nucleopolyhedrovirus|Rep:
LEF-4 - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 475
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Frame = -1
Query: 297 MIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQS-------- 142
++EKEISY++N SQDLLY I ++YI + Q+Y D+ D +G R+RI +Q
Sbjct: 3 IVEKEISYTVNVSQDLLYIIFDTYISEKFQFKQEYRDVTDNDGVRSRILVQDDGGDDGDG 62
Query: 141 ---ACNNIISSVKKTNSKHKKFVY 79
N I VKK+ ++FVY
Sbjct: 63 KIVIDNGTICRVKKSTKSTERFVY 86
>UniRef50_Q0ZNY8 Cluster: Major viral capsid protein 39; n=3;
Nucleopolyhedrovirus|Rep: Major viral capsid protein 39
- Neodiprion abietis nucleopolyhedrovirus
Length = 315
Score = 56.0 bits (129), Expect = 9e-07
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 379 NRCIFASIVSFDACITYKSPCSPDAYHDDGWFICNSHLIKRFKMS-KMVLPIFDEDDNQF 555
N CIF D P + + G +IC HL F++S + + + D +
Sbjct: 28 NECIFRYARENDKLNQTIDPGYNCSNYLSGLYICQKHLEDYFRLSLRKINQLEGTDQGRV 87
Query: 556 --KMTIARHLVGNKERGIKRILIPSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVIC 729
++++ L N R+++P+ NY+++F + + + QL+FHL+Y N+ A++ IC
Sbjct: 88 FERLSVLSRLPHNYRN---RVIVPTRRNYEDIFKVAYLPISYQLVFHLLYQNQSAIDKIC 144
Query: 730 DNLK 741
++K
Sbjct: 145 QDVK 148
>UniRef50_Q8JRX2 Cluster: Late expression factor 4; n=1; Phthorimaea
operculella granulovirus|Rep: Late expression factor 4 -
Phthorimaea operculella granulovirus
Length = 441
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = -1
Query: 291 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 154
E+E+SY+ +SQD+LY+ L ++ N + + +Y ++YDEN RTRI
Sbjct: 5 EQEVSYTFTYSQDVLYR-LADWLEANMTKSDEYVEMYDENDTRTRI 49
>UniRef50_Q91EW0 Cluster: ORF95 LEF-4; n=4; Granulovirus|Rep: ORF95
LEF-4 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 480
Score = 46.4 bits (105), Expect = 7e-04
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = -1
Query: 291 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVK 112
E+E+SY+ +SQD+LY+ L ++ N AQ Y ++YD N RTRI ++S+VK
Sbjct: 5 EQEVSYTFTYSQDVLYR-LKGWLDANLCDAQSYVEVYDTNDVRTRI----YDGGVMSTVK 59
Query: 111 K 109
K
Sbjct: 60 K 60
>UniRef50_Q6QXM5 Cluster: ORF85; n=1; Agrotis segetum
granulovirus|Rep: ORF85 - Agrotis segetum granulosis
virus (AsGV) (Agrotis segetumgranulovirus)
Length = 468
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = -1
Query: 291 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSV 115
E EISY+ F QD+LY I N ++ ++S+ ++Y ++ D+N R+RI I ++ SV
Sbjct: 7 EFEISYTFTFPQDMLYLIKN-FLDKHFSIKEEYVEVLDKNNVRSRIFIDGTIKSVKKSV 64
>UniRef50_Q9DVV5 Cluster: PxORF78 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF78 peptide - Plutella xylostella
granulovirus
Length = 432
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = -1
Query: 297 MIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 154
MIE E+SY+ + QD+LY I + + ++Y ++ DENG+RTR+
Sbjct: 1 MIEHEVSYTFTYPQDVLYSI-KALFDQRLQVVEEYVEIIDENGYRTRM 47
>UniRef50_Q65345 Cluster: Lef-4 protein; n=1; Autographa californica
nucleopolyhedrovirus|Rep: Lef-4 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 64
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 64 GIFRPINKFFVFGISLFHA 120
GIFRPINKFFVFGISLFHA
Sbjct: 46 GIFRPINKFFVFGISLFHA 64
>UniRef50_Q7T9T5 Cluster: Lef-4; n=1; Adoxophyes orana
granulovirus|Rep: Lef-4 - Adoxophyes orana granulovirus
(AoGV)
Length = 452
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = -1
Query: 318 NMDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI 154
N D+ N + E+EI+Y+ +SQD++YKI N ++ N L + Y ++ D + RTRI
Sbjct: 4 NCDN-NCVKEQEIAYTFAYSQDVIYKI-NDWLQQNVKLHETYVEIIDCDNLRTRI 56
>UniRef50_Q9PYT3 Cluster: ORF110; n=3; Granulovirus|Rep: ORF110 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 447
Score = 36.7 bits (81), Expect = 0.61
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = -1
Query: 291 EKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDENGFRTRI---PIQSACNNIIS 121
E E+SY++ QDLLYKI Y+ + + Y ++ D N RTR+ ++S ++
Sbjct: 11 EYEMSYTLTLPQDLLYKI-KQYLDKRFFNKECYVEIIDVNHTRTRLQDSKLESVTKRLVD 69
Query: 120 SVK 112
S K
Sbjct: 70 SNK 72
>UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|Rep:
Expressed protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 356
Score = 33.9 bits (74), Expect = 4.3
Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -1
Query: 330 VAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYI---VPNYSLAQQYFDLYDENGFRT 160
+ V+N +F+ + ++Y +N+ +Y ++ I ++SL Q Y D++D+ R
Sbjct: 113 IEVVNRLRKDFVYDTLLNYGVNYDNTWIYDKIHHEINQFCSSHSLQQVYIDIFDQIDERM 172
Query: 159 RIPIQSACNNIISSVK 112
+ +Q+ C ++
Sbjct: 173 KDALQADCTRYAPGIE 188
>UniRef50_Q239Z2 Cluster: Calpain family cysteine protease containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Calpain
family cysteine protease containing protein - Tetrahymena
thermophila SB210
Length = 1254
Score = 33.1 bits (72), Expect = 7.5
Identities = 30/117 (25%), Positives = 53/117 (45%)
Frame = -1
Query: 420 ARVERHDGRENAAVNSHLSRRHTHGH*RHIVAVINMDHGNFMIEKEISYSINFSQDLLYK 241
++V DG+ N + +R R I N+ GN++I+ +I + N +
Sbjct: 1076 SQVTGPDGKPNQRYIGAIQKRD-----REIFVECNLTPGNYLIQSKIFWETNAA------ 1124
Query: 240 ILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPK 70
NSY+V Y +AQ D D+N P + C +I +K ++K K+ +P+
Sbjct: 1125 --NSYVVSTYGVAQTKLDQVDKNQVP---PFMNEC--LIQKARK-STKLKQLRQYPE 1173
>UniRef50_P43961 Cluster: Uncharacterized protein HI0178 precursor;
n=10; Haemophilus influenzae|Rep: Uncharacterized
protein HI0178 precursor - Haemophilus influenzae
Length = 160
Score = 33.1 bits (72), Expect = 7.5
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = -1
Query: 336 HIVAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYIVPNYSLAQQYFDLYDE 175
H AV+N+D G ++ + Y+ + Q YKILN NY L Q D YDE
Sbjct: 67 HFDAVVNLDRGLYVYPEPKRYARSVRQ---YKILN---CANYHLTQIRTDFYDE 114
>UniRef50_Q06VK4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 937
Score = 27.1 bits (57), Expect(2) = 7.8
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = -1
Query: 552 LIVVFVENGQNHF*HFKTFDEVAVADKPSVVMIRVGRTR*LVCYARV 412
+ ++ N HF + KT V D P++ +IR R ++C ++
Sbjct: 43 MFAIYGGNAPGHFDNPKTKTTRVVLDMPNITIIRSRRPNAIMCIIKI 89
Score = 24.6 bits (51), Expect(2) = 7.8
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 333 IVAVINMDHGNFMIEKEISYSINFSQDLLYKILNSYIV 220
I+ +I + HGN YS+ SQ++L IL + ++
Sbjct: 83 IMCIIKIVHGNNSATSAGYYSLQKSQEMLKMILGNNLM 120
>UniRef50_Q97MB6 Cluster: Cytosine/guanine deaminase related
protein; n=6; Clostridiales|Rep: Cytosine/guanine
deaminase related protein - Clostridium acetobutylicum
Length = 428
Score = 32.7 bits (71), Expect = 9.9
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Frame = -1
Query: 330 VAVINMDHG--NFMIEKEISYSINFSQDLLYK------ILNSYIVPNY--SLAQQYFDLY 181
V +NMD+ +++ E I+ S+N +++++ K I+ I P + S + + D
Sbjct: 154 VGKVNMDYNCPDYLTENYIT-SLNDTEEIILKYKDKSNIVKPIITPRFVPSCSNELMDGL 212
Query: 180 DENGFRTRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTXRVGAVG 43
+ ++ R+P+QS + + + S HKK ++ + + G G
Sbjct: 213 GKLSYKYRLPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFG 258
>UniRef50_Q8I326 Cluster: Putative uncharacterized protein PFI0615w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0615w - Plasmodium falciparum
(isolate 3D7)
Length = 906
Score = 32.7 bits (71), Expect = 9.9
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 132 YCKRSE*VYECESRFRRTNRNIVV-PANN*EQYKNLKFYTTNLG*NLLNKR 281
Y K E + C RF++TNR I++ NN E F+T N+ N++ R
Sbjct: 573 YRKEKENLKLCFVRFKKTNRCIIIKEKNNEEDNLQSTFFTENIKSNIIKSR 623
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,681,105
Number of Sequences: 1657284
Number of extensions: 13554773
Number of successful extensions: 32628
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32610
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -