Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3o24
(747 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023115-1|AAY55531.1| 406|Drosophila melanogaster IP10861p pro... 30 2.9
BT023063-1|AAY55479.1| 407|Drosophila melanogaster IP10961p pro... 30 2.9
AE013599-627|AAF59107.2| 399|Drosophila melanogaster CG30371-PA... 30 2.9
AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH0352... 30 3.9
AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,... 30 3.9
AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,... 30 3.9
U15004-1|AAC46492.1| 631|Drosophila melanogaster IRBP protein. 29 6.7
BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p pro... 29 6.7
AY071244-1|AAL48866.1| 535|Drosophila melanogaster RE28533p pro... 29 6.7
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy... 29 6.7
AE014297-1290|AAF54631.1| 631|Drosophila melanogaster CG5247-PA... 29 6.7
U05208-1|AAA20644.1| 631|Drosophila melanogaster yolk protein f... 29 8.9
>BT023115-1|AAY55531.1| 406|Drosophila melanogaster IP10861p
protein.
Length = 406
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +1
Query: 619 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYT 747
PS++ Y + +N+ M+ EQ + NN+ AV + N++++
Sbjct: 223 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWS 265
>BT023063-1|AAY55479.1| 407|Drosophila melanogaster IP10961p
protein.
Length = 407
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +1
Query: 619 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYT 747
PS++ Y + +N+ M+ EQ + NN+ AV + N++++
Sbjct: 224 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWS 266
>AE013599-627|AAF59107.2| 399|Drosophila melanogaster CG30371-PA
protein.
Length = 399
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +1
Query: 619 PSATNYQEVFNLNSMMQAEQLIFHLIYNNEEAVNVICDNLKYT 747
PS++ Y + +N+ M+ EQ + NN+ AV + N++++
Sbjct: 216 PSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWS 258
>AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH03529
protein.
Length = 594
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = -1
Query: 279 SYSINFSQDLLYKILN----SYIVPNYSLAQQ--YFDLYDENGFRTRIPIQS 142
SYSIN++ DLL K LN + IV N SL ++ Y ++ + G++ + I S
Sbjct: 452 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEHVYDEIKHKEGYKDPVKIYS 503
>AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,
isoform B protein.
Length = 881
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = -1
Query: 279 SYSINFSQDLLYKILN----SYIVPNYSLAQQ--YFDLYDENGFRTRIPIQS 142
SYSIN++ DLL K LN + IV N SL ++ Y ++ + G++ + I S
Sbjct: 739 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEHVYDEIKHKEGYKDPVKIYS 790
>AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,
isoform A protein.
Length = 594
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = -1
Query: 279 SYSINFSQDLLYKILN----SYIVPNYSLAQQ--YFDLYDENGFRTRIPIQS 142
SYSIN++ DLL K LN + IV N SL ++ Y ++ + G++ + I S
Sbjct: 452 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEHVYDEIKHKEGYKDPVKIYS 503
>U15004-1|AAC46492.1| 631|Drosophila melanogaster IRBP protein.
Length = 631
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1
Query: 288 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISS 118
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++ +
Sbjct: 240 REILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRT 299
Query: 117 VKKTNSKHKK 88
+ + +K
Sbjct: 300 KRVITVQKQK 309
>BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p protein.
Length = 1031
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = -1
Query: 279 SYSINFSQDLLYKILN----SYIVPNYSLAQQYFDLYDE 175
SYSIN++ DLL K LN + IV N SL +++ +YDE
Sbjct: 900 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEH--VYDE 936
>AY071244-1|AAL48866.1| 535|Drosophila melanogaster RE28533p
protein.
Length = 535
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1
Query: 288 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISS 118
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++ +
Sbjct: 144 REILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRT 203
Query: 117 VKKTNSKHKK 88
+ + +K
Sbjct: 204 KRVITVQKQK 213
>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
chain protein.
Length = 4559
Score = 29.1 bits (62), Expect = 6.7
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = -1
Query: 345 H*RHIVAVINMDHGNFMIEKEI-----SYSINF-SQDLLYKILNSYIVPNYSLAQQYFD 187
H +IVA +N G+F I+ + S+++N SQD L+ ILNS + + Q FD
Sbjct: 2656 HKCNIVACMNPSAGSFTIDPRLQRHFCSFAVNPPSQDALFHILNSILSQHMDNPIQKFD 2714
>AE014297-1290|AAF54631.1| 631|Drosophila melanogaster CG5247-PA
protein.
Length = 631
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1
Query: 288 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISS 118
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++ +
Sbjct: 240 REILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRT 299
Query: 117 VKKTNSKHKK 88
+ + +K
Sbjct: 300 KRVITVQKQK 309
>U05208-1|AAA20644.1| 631|Drosophila melanogaster yolk protein
factor 1 beta subunit protein.
Length = 631
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1
Query: 288 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISS 118
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++ +
Sbjct: 240 REILPDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRT 299
Query: 117 VKKTNSKHKK 88
+ + +K
Sbjct: 300 KRVITVQKQK 309
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,688,045
Number of Sequences: 53049
Number of extensions: 626738
Number of successful extensions: 1551
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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