Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3o22
         (606 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Y399 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_Q8IBJ6 Cluster: Putative uncharacterized protein MAL7P1...    33   4.0  
UniRef50_Q4RW18 Cluster: Chromosome 9 SCAF14991, whole genome sh...    33   6.9  
UniRef50_Q5X946 Cluster: Putative uncharacterized protein; n=2; ...    33   6.9  
UniRef50_Q8IDB2 Cluster: Putative uncharacterized protein MAL13P...    33   6.9  
UniRef50_Q22KK8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_Q1VNL5 Cluster: Protoheme IX farnesyltransferase; n=1; ...    32   9.2  

>UniRef50_Q4Y399 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 83

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -2

Query: 590 YVYYEFHNTITFLFYILHTVKLLLIGN*SYFFFIRLSNNFVSLICVFWRFF 438
           ++++++H  I FLF++ H VKL       Y+FF+     F  +   F+ FF
Sbjct: 2   FIFFKYHLMICFLFFVYHQVKLY------YYFFLIFFELFYLVYFFFFFFF 46


>UniRef50_Q8IBJ6 Cluster: Putative uncharacterized protein
           MAL7P1.142; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.142 - Plasmodium
           falciparum (isolate 3D7)
          Length = 418

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -2

Query: 590 YVYYEFHNTITFLFYILHTVKLL--LIGN*SYFFFIRLSNNFVSLICVFWRFFCF 432
           Y+Y   H+T++F ++I+H +  L  L+   S+ +F+    +F   +  F  FF F
Sbjct: 2   YIYIIMHSTVSFFYFIVHFISFLYFLVHFISFLYFLVHFISFFYFLVHFISFFYF 56


>UniRef50_Q4RW18 Cluster: Chromosome 9 SCAF14991, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
           SCAF14991, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 335

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 584 YYEFHNTITFLFYILHTVKLLLIGN*SYFFFIRLSNNFVSLICVF-WRFFCFSTG 423
           Y  FHNT   LFY+   V  LL      F+F+      V  + +  +R FCF TG
Sbjct: 203 YCVFHNTTATLFYLSDCVAALL----DLFWFLPWLRGVVEFMLLMPYRIFCFFTG 253


>UniRef50_Q5X946 Cluster: Putative uncharacterized protein; n=2;
           Legionella pneumophila|Rep: Putative uncharacterized
           protein - Legionella pneumophila (strain Paris)
          Length = 291

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 581 YEFHNTITFLFYILHTVKLLLIGN*SYFFFIRLSNNFVSLICVFW 447
           + FH     LF  L  V ++L+G    +FF+ L ++F+  I VFW
Sbjct: 132 FRFHPVEYILFNALKIVLIILLGP---YFFVILFSDFIQAILVFW 173


>UniRef50_Q8IDB2 Cluster: Putative uncharacterized protein
            MAL13P1.293; n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL13P1.293 - Plasmodium
            falciparum (isolate 3D7)
          Length = 3270

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 13/44 (29%), Positives = 28/44 (63%)
 Frame = -2

Query: 590  YVYYEFHNTITFLFYILHTVKLLLIGN*SYFFFIRLSNNFVSLI 459
            Y+YY++ N    +FY+ +T  + ++   +Y+FF+  +N++  LI
Sbjct: 1168 YLYYKYLN----IFYVSNTYSVFILDTLNYYFFLYRTNHYKKLI 1207


>UniRef50_Q22KK8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1244

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 330 LFN*TVVFGSGFFK*NFLLKRNLFFSVDFLFQYFVVKRN 214
           +FN TV+  SGF   NFLL   LF  + F F Y +++ N
Sbjct: 29  IFNSTVI--SGFSPQNFLLLSQLFLDIKFEFNYQIIQLN 65


>UniRef50_Q1VNL5 Cluster: Protoheme IX farnesyltransferase; n=1;
           Psychroflexus torquis ATCC 700755|Rep: Protoheme IX
           farnesyltransferase - Psychroflexus torquis ATCC 700755
          Length = 295

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 14/39 (35%), Positives = 26/39 (66%)
 Frame = -2

Query: 566 TITFLFYILHTVKLLLIGN*SYFFFIRLSNNFVSLICVF 450
           T+T LF +L+ + L++IG+ +  +F+ L   F+SL+  F
Sbjct: 89  TLTPLFAVLYGMALVVIGSVTLAYFVNLLTGFLSLLTAF 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,201,306
Number of Sequences: 1657284
Number of extensions: 6145737
Number of successful extensions: 12202
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12197
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)