Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3o17
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    27   0.17 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.1  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.3  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = -2

Query: 140 SLFYTCTFPNVYRQLLQTRPNARRIAPLRRFVCRRCTCERXQXY 9
           +L++   F    R  LQ +  A ++ P R+F+C+ C  +  + Y
Sbjct: 50  ALYHKLQFRGPPRTPLQPKLVAGKLKPKRQFICKYCNRQFTKSY 93


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = -1

Query: 573 HSFGFKNLSSVDISLQTLHSYKTELSTNKFITLTVLLIVSSFSINNRQFDINSFTYICI 397
           H   F  +    ++++   S K  + +   +   +L  V+ F I++   DINS  Y C+
Sbjct: 331 HRVVFTAMGLYVLNMEHFFSVKCSIQSESLLN-DILFPVAGF-ISDFDCDINSIQYFCL 387



 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 144 LFSILYLYISKCLSSIIANAAERTPHCTFASICM 43
           LF++ Y+Y S   +SII           F S C+
Sbjct: 153 LFTVYYIYYSVHEASIINFGYTLAKFMIFTSTCI 186


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 302 NVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQMYVNEL 421
           N ++F    K L   L ++KN  + CF N+  +    N+L
Sbjct: 262 NSVLFQNVYKPLPIVLSIVKNCLSYCF-NLYHLASKSNQL 300


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +2

Query: 302 NVIVFYPYLKQLRDALKLIKNSFACCFKNINSMQMYVNEL 421
           N ++F    K L   L ++KN  + CF N+  +    N+L
Sbjct: 262 NSVLFQNVYKPLPIVLSIVKNCLSYCF-NLYHLASKSNQL 300


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 546 SVDISLQTLHSYKTELSTNKFITLTVL 466
           S++I L   ++ K +L+TN+   LTVL
Sbjct: 139 SINIILSDPNTNKLKLNTNESYELTVL 165


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 521 NVCKEISTDERFLKPKECCE 580
           N C E + DE   +P  CC+
Sbjct: 87  NECPEPTCDEPVHRPGRCCK 106


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 146 IYSLFYTCTF 117
           I+ LFY CTF
Sbjct: 20  IHPLFYVCTF 29


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 501 LSTNKFITLTVLLIVSSFSINNRQFDINS 415
           ++  KFI  T LL+    +I    FDIN+
Sbjct: 5   INHKKFINTTKLLLWCDQTIGLITFDINT 33


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 146 IYSLFYTCTF 117
           I+ LFY CTF
Sbjct: 20  IHPLFYVCTF 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,016
Number of Sequences: 336
Number of extensions: 3261
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)