Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3o17
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.9  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   5.9  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   5.9  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   5.9  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 152  KKIYSLFYTCTFPNVYRQLLQTRPNARRIAPLRRFVCRR 36
            K   S+F       V+ +L+    ++  +A LRRFV RR
Sbjct: 1446 KGYISIFVCFVTKAVHIELVSNLTSSAFLAALRRFVARR 1484


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 22  LSHVHRRHTNRRKGAMRR 75
           L HVH   T RR+G  RR
Sbjct: 137 LEHVHSGATPRRRGLTRR 154


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 22  LSHVHRRHTNRRKGAMRR 75
           L HVH   T RR+G  RR
Sbjct: 137 LEHVHSGATPRRRGLTRR 154


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae
          acetylcholinesterase protein.
          Length = 623

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 22 LSHVHRRHTNRRKGAMRR 75
          L HVH   T RR+G  RR
Sbjct: 23 LEHVHSGATPRRRGLTRR 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,528
Number of Sequences: 2352
Number of extensions: 13527
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)