Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3o14
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 170 9e-43
AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear recep... 32 0.44
AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormo... 32 0.44
AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormo... 32 0.44
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 31 0.58
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 31 1.0
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical pr... 30 1.3
AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear recep... 30 1.8
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 30 1.8
AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear recep... 30 1.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical... 29 2.3
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.1
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 28 5.4
U55855-3|AAA98019.2| 893|Caenorhabditis elegans Ubiquitin-like ... 28 5.4
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 28 7.1
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 28 7.1
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 7.1
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 28 7.1
Z81585-2|CAB04682.2| 303|Caenorhabditis elegans Hypothetical pr... 27 9.4
U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protei... 27 9.4
AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical ... 27 9.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 9.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 9.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 9.4
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 170 bits (413), Expect = 9e-43
Identities = 76/142 (53%), Positives = 109/142 (76%)
Frame = +3
Query: 255 KLSDLVSQLQQSYQLTTAGRFPEAIERLQGVAQRVPLLLVDSKAELSEAQQLLAVCRDYL 434
KLS L +LQ++YQ+TT G+F +A+E+L+ + VPL++V SK E++EA+QL+ + R+YL
Sbjct: 1011 KLSQLAKKLQKAYQMTTNGKFGDAVEKLREILLSVPLIVVSSKQEVAEAEQLITITREYL 1070
Query: 435 VGLAMETARKAMPKNTVDEQKRTCEMAAYFTHCKLQPVHQILTLRTALNMFFKLKNYRTA 614
L +ET RK +PK +++ KR E+AAYFTH +LQP+H+ILTLR+A+N FFK+K +T
Sbjct: 1071 AALLLETYRKDLPKTNLEDAKRNAELAAYFTHFELQPMHRILTLRSAINTFFKMKQMKTC 1130
Query: 615 ASFARRLLELGPRPEVAQQARK 680
AS +RLLEL P+PEVA Q RK
Sbjct: 1131 ASLCKRLLELAPKPEVAAQIRK 1152
>AF273820-1|AAG15169.1| 624|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 624
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 312 GPPWSTGSSAAADSPSRLASTLIGRPVLPPPQP 214
G P SS+ ++ + AST++ P LPPP P
Sbjct: 2 GSPAIPSSSSCSEPSTSQASTVVSAPTLPPPSP 34
>AF047660-6|AAV34786.1| 659|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform d protein.
Length = 659
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 312 GPPWSTGSSAAADSPSRLASTLIGRPVLPPPQP 214
G P SS+ ++ + AST++ P LPPP P
Sbjct: 37 GSPAIPSSSSCSEPSTSQASTVVSAPTLPPPSP 69
>AF047660-5|AAM54168.1| 733|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 66, isoform c protein.
Length = 733
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 312 GPPWSTGSSAAADSPSRLASTLIGRPVLPPPQP 214
G P SS+ ++ + AST++ P LPPP P
Sbjct: 111 GSPAIPSSSSCSEPSTSQASTVVSAPTLPPPSP 143
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 31.5 bits (68), Expect = 0.58
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = -2
Query: 318 GTGPPWSTGSSAAADSPSRLASTLIGRPVLPPPQPAGGGRTPPWRSACFITLQSTSTQ 145
GTG S + AA+ P + P PPPQPA R P W A Q+ ++Q
Sbjct: 82 GTGWSKSDNPNGAAEPPQTPTNQAPAVPPPPPPQPANDLR-PSWLVAANAEQQANNSQ 138
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -2
Query: 312 GPPWSTGSSAAADSPSRL-ASTLIGRPVLPPPQPAGGGRTPPWR 184
GPP G+ P + A L G P PP QP PPW+
Sbjct: 103 GPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWK 146
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 303 WSTGSSAAADSPSRLASTLIGRPV-LPPPQPAGGGRTPP 190
+S GS SP T RP +PPP PA G PP
Sbjct: 1482 FSRGSPIRTSSPVPSTQTTPSRPPQMPPPPPASGKTIPP 1520
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 303 WSTGSSAAADSPSRLASTLIGRPV-LPPPQPAGGGRTPP 190
+S GS SP T RP +PPP PA G PP
Sbjct: 1482 FSRGSPIRTSSPVPSTQTTPSRPPQMPPPPPASGKTIPP 1520
>Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical
protein C33A12.7 protein.
Length = 237
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 551 VHGLELAVREVGGHLAGTFLFVDGVLRHRFPG 456
+ GL+L VRE GH G +V+ LR F G
Sbjct: 108 IGGLKLEVRETPGHTNGCLTYVEHSLRSAFTG 139
>AY305835-1|AAR11980.1| 618|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 618
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 306 PWSTGSSAAADSPSRLASTLIGRPVLPPPQP 214
P SS+ ++ + AST++ P LPPP P
Sbjct: 2 PAIPSSSSCSEPSTSQASTVVSAPTLPPPSP 32
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Frame = -2
Query: 270 PSRLASTLIGRPVLPPPQPAGGGRTPPWRSACFITLQST----STQHIHKKRSINISIVF 103
P+ A+ I P PQ R P +R ++ ST H ++ I+ ++
Sbjct: 140 PAAAAAAPISPKAAPTPQSPAPNRVPHYRQTSTASVSSTIPPPPPPHRKQENGIDYEAMY 199
Query: 102 QH--TKFESWNEKVL 64
+ TKF+ WN+ L
Sbjct: 200 KSLLTKFDEWNQMKL 214
>AF273819-1|AAG15168.1| 619|Caenorhabditis elegans nuclear receptor
NHR-66 protein.
Length = 619
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 306 PWSTGSSAAADSPSRLASTLIGRPVLPPPQP 214
P SS+ ++ + AST++ P LPPP P
Sbjct: 1 PAIPSSSSCSEPSTSQASTVVSAPTLPPPSP 31
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 191 GGVLPPPAGCGGGSTG 238
GG PPPA CGGG G
Sbjct: 46 GGCAPPPAPCGGGCGG 61
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 191 GGVLPPPAGCGGGSTG 238
GG PPPA CGGG G
Sbjct: 70 GGCAPPPAPCGGGCGG 85
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 191 GGVLPPPAGCGGGSTG 238
GG PPPA CGGG G
Sbjct: 46 GGCAPPPAPCGGGCGG 61
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 191 GGVLPPPAGCGGGSTG 238
GG PPPA CGGG G
Sbjct: 70 GGCAPPPAPCGGGCGG 85
>AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical
protein F32D1.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = -2
Query: 318 GTGPPWSTGSSAAADS-PSRLASTLIGRPVLPPPQPAGGGRTPPW----RSACFITLQST 154
G+G +G+ ++ S P+R++ + PPP+P G P+ S + ST
Sbjct: 157 GSGSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPPAGHQNPFLGNQPSTSNTSEPST 216
Query: 153 STQHIHKKRSINIS 112
STQ + R+ IS
Sbjct: 217 STQGVSPSRTSKIS 230
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 318 GTGPPWSTGSSAAADSP-SRLASTLIGRPVLPPPQPAGGG 202
G PP S+ S A S A+ + P PPP P GGG
Sbjct: 37 GGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGG 76
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 318 GTGPPWSTGSSAAADSP-SRLASTLIGRPVLPPPQPAGGG 202
G PP S+ S A S A+ + P PPP P GGG
Sbjct: 37 GGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGG 76
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 285 AAADSPSRLASTLIGRPVLPPPQPAGGGRTPPWRSACFITLQSTSTQH 142
A D P + +T + PV+PPP P G R S+ FI+ S +T H
Sbjct: 4086 AHCDVP-HMRNTRVLVPVVPPPLPPRGFRND---SSNFISTSSVTTSH 4129
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 285 AAADSPSRLASTLIGRPVLPPPQPAGGGRTPPWRSACFITLQSTSTQH 142
A D P + +T + PV+PPP P G R S+ FI+ S +T H
Sbjct: 4086 AHCDVP-HMRNTRVLVPVVPPPLPPRGFRND---SSNFISTSSVTTSH 4129
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 285 AAADSPSRLASTLIGRPVLPPPQPAGGGRTPPWRSACFITLQSTSTQH 142
A D P + +T + PV+PPP P G R S+ FI+ S +T H
Sbjct: 4086 AHCDVP-HMRNTRVLVPVVPPPLPPRGFRND---SSNFISTSSVTTSH 4129
>U55855-3|AAA98019.2| 893|Caenorhabditis elegans Ubiquitin-like
protease protein 2 protein.
Length = 893
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 315 FPEAIERLQGVAQRVPLLLVDSKAELSEAQQLLAVCRDYLVGLAMETA-RKAMPKNTVDE 491
FPEA + + +V L++ +A+ +L R+ GL+ E A RKA + V+E
Sbjct: 776 FPEANKMCDLMRDKVYNLILQ-QADKPARSRLAKFERENKCGLSREGALRKARRHSAVNE 834
Query: 492 QKRTCEMAAYFTHCKLQPVHQ 554
++ Y H L P H+
Sbjct: 835 RRTKRHRDYYARHYSLSPPHR 855
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 318 GTGPPWSTGSSAAADSPSRLASTLIGRPV-LPPPQPAGGGRTPP 190
GT P ++ S+ SP+ + PV LPPP A G T P
Sbjct: 2174 GTSAPVASTSTTNTPSPTNQSPVTQAPPVTLPPPSVATAGPTGP 2217
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 315 TGPPWSTGSSAAADSPSRLASTLIG-RPVLPPPQPAGGGRTPP 190
T P ST S+ A+ S S +++ G P +PPP+P PP
Sbjct: 289 TLPQISTSSNGASPSVSPASTSPSGPAPSIPPPRPPALAPPPP 331
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 376 TPRPSCPRPSSYWPSAGTTSWDSPWRPPGKRCRRTPSTNRNVP 504
T P + SS + T +PW PP R+TP T + P
Sbjct: 378 TQTPPTTQTSSTTQTPRTKQTWAPWTPPTTTTRQTPPTTQAPP 420
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 315 TGPPWSTGSSAAADSPSRLASTLIG-RPVLPPPQPAGGGRTPP 190
T P ST S+ A+ S S +++ G P +PPP+P PP
Sbjct: 289 TLPQISTSSNGASPSVSPASTSPSGPAPSIPPPRPPALAPPPP 331
>Z81585-2|CAB04682.2| 303|Caenorhabditis elegans Hypothetical
protein T05E12.2 protein.
Length = 303
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 73 LIPTFELRVLEDYRNINRSLLVYVLC*CGLKCYKTCGAPGRRSASSCWLR 222
+ PTF + +L +N + ++V C L+ C A G S ++C+L+
Sbjct: 128 IFPTFIIFILSICIGLNEDVFLFVFCEFSLQIRPNCAAFG-CSINACFLK 176
>U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protein
174 protein.
Length = 314
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -2
Query: 318 GTGPPWSTGSSAAADSPSRLASTLIGRPVLPPPQPAGGGRTP 193
G GPP + G+ A +P + I + P PAG P
Sbjct: 204 GQGPPGNAGAPGANGNPGNAGTPGIPGKTIEVPAPAGPAGAP 245
>AF098989-3|AAK18953.2| 569|Caenorhabditis elegans Hypothetical
protein F47G6.2 protein.
Length = 569
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 227 RRRSQQEEAERLPGAPHVL*HFNPHQH-NTYTRSDRLIFL*SSSTRSSKV 81
R R Q ++E LP HV+ H+H T+T S+ +FL SS + +K+
Sbjct: 162 RSRKGQLKSELLPKLTHVILAEEDHKHAGTFTLSE--VFLKSSKEKIAKL 209
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 318 GTGPPWSTGSSAAADSPSRLASTLIGRPVLPPPQPAGGGRTPP 190
G+G P +A + P R S PPP PAGG PP
Sbjct: 251 GSGSP-PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 318 GTGPPWSTGSSAAADSPSRLASTLIGRPVLPPPQPAGGGRTPP 190
G+G P +A + P R S PPP PAGG PP
Sbjct: 272 GSGSP-PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 318 GTGPPWSTGSSAAADSPSRLASTLIGRPVLPPPQPAGGGRTPP 190
G+G P +A + P R S PPP PAGG PP
Sbjct: 257 GSGSP-PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,531,637
Number of Sequences: 27780
Number of extensions: 277360
Number of successful extensions: 1399
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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