Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3o12
(805 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 129 1e-29
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 129 1e-29
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 129 1e-29
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 129 1e-29
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 129 1e-29
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 129 1e-29
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 129 1e-29
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 129 1e-29
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 129 1e-29
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 9e-29
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 121 3e-27
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 32 2.8
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 32 2.8
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 32 2.8
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 32 2.8
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 129 bits (311), Expect = 1e-29
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 129 bits (311), Expect = 1e-29
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 129 bits (311), Expect = 1e-29
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 129 bits (311), Expect = 1e-29
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 129 bits (311), Expect = 1e-29
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 129 bits (311), Expect = 1e-29
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 129 bits (311), Expect = 1e-29
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 129 bits (311), Expect = 1e-29
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 129 bits (311), Expect = 1e-29
Identities = 59/67 (88%), Positives = 65/67 (97%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 9e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +1
Query: 487 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 666
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 667 LFE 675
LFE
Sbjct: 62 LFE 64
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 121 bits (292), Expect = 3e-27
Identities = 56/67 (83%), Positives = 63/67 (94%)
Frame = +1
Query: 478 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 657
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 658 PKRLFEG 678
P+RLFEG
Sbjct: 68 PRRLFEG 74
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 31.9 bits (69), Expect = 2.8
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 676 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 518
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 517 QKDDEVSRTSLKIPTVL 467
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 31.9 bits (69), Expect = 2.8
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 676 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 518
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 738
Query: 517 QKDDEVSRTSLKIPTVL 467
KD+ ++ S +P VL
Sbjct: 739 MKDNFLTSVSYSLPIVL 755
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 31.9 bits (69), Expect = 2.8
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 676 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 518
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 808
Query: 517 QKDDEVSRTSLKIPTVL 467
KD+ ++ S +P VL
Sbjct: 809 MKDNFLTSVSYSLPIVL 825
>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
Length = 2413
Score = 31.9 bits (69), Expect = 2.8
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -1
Query: 676 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 518
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 517 QKDDEVSRTSLKIPTVL 467
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,969,923
Number of Sequences: 237096
Number of extensions: 2137010
Number of successful extensions: 7139
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7139
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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