Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3o09
(537 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2; ... 152 6e-36
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 126 4e-28
UniRef50_P25695 Cluster: Uncharacterized 41.5 kDa protein in P6.... 76 5e-13
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 70 3e-11
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 64 1e-09
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 60 2e-08
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 55 1e-06
UniRef50_P24649 Cluster: DNA-binding protein; n=6; Nucleopolyhed... 41 0.021
UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R... 35 1.0
UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases... 34 1.8
UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2; Pla... 34 1.8
UniRef50_UPI00015ADEEB Cluster: hypothetical protein NEMVEDRAFT_... 33 3.1
UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei... 33 4.2
UniRef50_A7GD35 Cluster: Putative sensor histidine kinase; n=1; ... 33 4.2
UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas... 33 5.5
UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2; ... 32 7.3
UniRef50_Q8JKL2 Cluster: Copine-like protein T2I1.10; n=1; Helio... 32 9.6
UniRef50_Q9K7H9 Cluster: BH3382 protein; n=1; Bacillus haloduran... 32 9.6
UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3; ... 32 9.6
UniRef50_P84180 Cluster: Putative gustatory receptor 22b; n=3; D... 32 9.6
>UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Plutella xylostella multiple
nucleopolyhedrovirus
Length = 74
Score = 152 bits (368), Expect = 6e-36
Identities = 68/83 (81%), Positives = 70/83 (84%)
Frame = -1
Query: 312 MNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIY 133
MNGSWIFCMC VYPGGVCNPSFC CV SNHMW+RLKN DGDDKPCLNCVIY
Sbjct: 1 MNGSWIFCMCGVYPGGVCNPSFCACV----------SNHMWYRLKNGDGDDKPCLNCVIY 50
Query: 132 VAVVFTLLIFFTLCIRRLNSQIY 64
VAV+FTLLIFFTLCIRRLNSQIY
Sbjct: 51 VAVIFTLLIFFTLCIRRLNSQIY 73
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 126 bits (303), Expect = 4e-28
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = -3
Query: 529 LXNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCGMSGC 350
+ NDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASF+RYCR+CGMSGC
Sbjct: 206 ILNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFIRYCRLCGMSGC 265
>UniRef50_P25695 Cluster: Uncharacterized 41.5 kDa protein in
P6.9-VP48 intergenic region; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 41.5 kDa
protein in P6.9-VP48 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 361
Score = 76.2 bits (179), Expect = 5e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 1 KVMENIRKHSNKNLNDQDELNIYLGVQSSNAKRKKY 108
KVMENIRKHSNKN NDQDELNIYLGVQSSNAKRKKY
Sbjct: 326 KVMENIRKHSNKNSNDQDELNIYLGVQSSNAKRKKY 361
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 70.1 bits (164), Expect = 3e-11
Identities = 27/47 (57%), Positives = 40/47 (85%)
Frame = -3
Query: 505 LQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMC 365
+ +S K KL+ ++G+SL++C+H FVTVE QTRAGDEI SF++YC++C
Sbjct: 260 INSSLKYKLYSINGMSLRACQHSFVTVEKQTRAGDEIVSFIKYCQIC 306
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 64.5 bits (150), Expect = 1e-09
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Frame = -3
Query: 529 LXNDKVIYLQNSN-----KNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMC 365
L +D+VIYL N N + L SG SL C H + TVE QTRAGDE+ SF+RYC +C
Sbjct: 200 LLSDRVIYLHNKNDVLDERTLLHGPSGTSLAPCLHRYATVERQTRAGDEMVSFIRYCELC 259
Query: 364 GM 359
M
Sbjct: 260 QM 261
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 60.5 bits (140), Expect = 2e-08
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = -3
Query: 496 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCGM 359
++ ++L +SG+SL C+H+FV VE Q RAGDE SF+R+C+ CG+
Sbjct: 251 ADADRLHPMSGMSLNLCKHEFVVVERQLRAGDEAVSFIRHCKRCGL 296
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 54.8 bits (126), Expect = 1e-06
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = -3
Query: 496 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCG 362
S+++ L L+G ++ SC HD+V E Q RAGDE+ SF+++C+ CG
Sbjct: 194 SSQSSLSNLNGYTIASCVHDYVIEEHQLRAGDEMVSFIKFCKKCG 238
>UniRef50_P24649 Cluster: DNA-binding protein; n=6;
Nucleopolyhedrovirus|Rep: DNA-binding protein - Bombyx
mori nuclear polyhedrosis virus (BmNPV)
Length = 65
Score = 40.7 bits (91), Expect = 0.021
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +3
Query: 153 MVYRRRRRSSTGATYGLT 206
MVYRRRRRSSTGATYGLT
Sbjct: 1 MVYRRRRRSSTGATYGLT 18
>UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R;
n=1; Danio rerio|Rep: PREDICTED: similar to tenascin-R -
Danio rerio
Length = 618
Score = 35.1 bits (77), Expect = 1.0
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -1
Query: 351 VNSSVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSFCVC 238
VN S C G L + S IFC GVC FCVC
Sbjct: 272 VNGSCQCRSGFLGEDCSLIFCANNCSQRGVCKEGFCVC 309
>UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases,
including glyoxylases; n=1; Brevibacterium linens
BL2|Rep: COG0491: Zn-dependent hydrolases, including
glyoxylases - Brevibacterium linens BL2
Length = 255
Score = 34.3 bits (75), Expect = 1.8
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +1
Query: 166 AVVVLQPVPHMV*HAGAVLQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHAT 345
+ VV+ P P M H A L V+ D A V D H+E G++ A EV +A
Sbjct: 28 SAVVIDPGPEMADHCQAFLAEVADRDLTAIVLTHQHAD--HSEMLGSIEQWAPEVPVYAV 85
Query: 346 INSQTFHTSDSSEG 387
+ HT ++G
Sbjct: 86 LERFARHTEPVADG 99
>UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2;
Plasmodium (Vinckeia)|Rep: Putative transcription factor
- Plasmodium yoelii yoelii
Length = 383
Score = 34.3 bits (75), Expect = 1.8
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 520 DKVIYLQNSNKNKLFELSGLSLKSCRHDFVT-VESQTRAGDEIASFLRYCRMC 365
DK + L +N + ++ C HDF+ V QTR+ DE ++ + YC C
Sbjct: 323 DKNVELFKEGENGAYNITYEKCTDCDHDFLYFVNIQTRSADEGSTIIYYCPNC 375
>UniRef50_UPI00015ADEEB Cluster: hypothetical protein
NEMVEDRAFT_v1g49759; n=1; Nematostella vectensis|Rep:
hypothetical protein NEMVEDRAFT_v1g49759 - Nematostella
vectensis
Length = 105
Score = 33.5 bits (73), Expect = 3.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 139 NLCSCSFYLINIFYALHSTIELPNICLTRLGRLNFCCCV 23
NLCSC +N+F +HS + N+C LN C CV
Sbjct: 45 NLCSCVHSDLNLFSCVHSDL---NLCSCVHSDLNLCSCV 80
>UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei
subsp. sakei 23K|Rep: DNA primase G - Lactobacillus
sakei subsp. sakei (strain 23K)
Length = 627
Score = 33.1 bits (72), Expect = 4.2
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 220 LQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHATINSQ 357
L+ +S +A +V D A V LA + P AVH +++EVT+ + Q
Sbjct: 77 LEQISFPEALTKVADFAGVTLADSYKPTAVHRESSEVTQFKQLYQQ 122
>UniRef50_A7GD35 Cluster: Putative sensor histidine kinase; n=1;
Clostridium botulinum F str. Langeland|Rep: Putative
sensor histidine kinase - Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F)
Length = 365
Score = 33.1 bits (72), Expect = 4.2
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 10 ENIRKHSNKNLNDQDELNIYLGVQSSNA---KRKKY**GKNYSYINY 141
EN++ NKNLND LN YL + NA R NY YI +
Sbjct: 148 ENVKNKFNKNLNDYKTLNSYLSHEQKNAISILRTNLEADGNYRYIKF 194
>UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas
atlantica T6c|Rep: NUDIX hydrolase - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 271
Score = 32.7 bits (71), Expect = 5.5
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -3
Query: 523 NDKVIYLQNSNKNKLFELSGLSLKSCR----HDFVTVESQTRAGDEIASFLRYCRMCGMS 356
N +V YL + N+L E +GL L R HD + + S ++A FLR R CG
Sbjct: 58 NGQVCYLVDMG-NELIEQAGLQLSHLRSLLLHDEMDIFSVAARAWQVALFLRTHRFCGQC 116
Query: 355 G 353
G
Sbjct: 117 G 117
>UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium avium|Rep: Putative uncharacterized
protein - Mycobacterium paratuberculosis
Length = 201
Score = 32.3 bits (70), Expect = 7.3
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 244 AEARVTDAARV--DLAHTEDPGAVH*QAAEVTEH-ATINSQTFHTSDSSEG 387
A TD AR+ D TEDPGA AA+VT H A + + +D S+G
Sbjct: 37 AATLTTDEARLLDDAGFTEDPGAYAEIAADVTAHMARLYGTAYSAADVSKG 87
>UniRef50_Q8JKL2 Cluster: Copine-like protein T2I1.10; n=1;
Heliothis zea virus 1|Rep: Copine-like protein T2I1.10 -
Heliothis zea virus 1
Length = 241
Score = 31.9 bits (69), Expect = 9.6
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 448 CRHDFVTVESQTRAGDEIASFLRYCRMC 365
C H F T+E QTR+GDE + C C
Sbjct: 165 CDHVFKTIEQQTRSGDEEITVSNICIKC 192
>UniRef50_Q9K7H9 Cluster: BH3382 protein; n=1; Bacillus
halodurans|Rep: BH3382 protein - Bacillus halodurans
Length = 356
Score = 31.9 bits (69), Expect = 9.6
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -1
Query: 258 NPSFCVCV*YRLKNGAGVSNHMWHR--LKNDDGDDKPCLNCVIYVAVVFTLLIFFTLCIR 85
N C C LKNG+G++ R + NDD D K L Y +V TL F +R
Sbjct: 26 NSEDCECHFLYLKNGSGLNTMGNARTYVTNDDEDIKALLYAKQYDVIVVTLDFLFVNRLR 85
Query: 84 RL 79
RL
Sbjct: 86 RL 87
>UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3;
Dehalococcoides|Rep: Putative uncharacterized protein -
Dehalococcoides sp. BAV1
Length = 193
Score = 31.9 bits (69), Expect = 9.6
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -1
Query: 396 SLRSFATVGCVECLAVNSSVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKN 217
+L +F + VE +AV ++ C GL + + C Y +CN C CV YRLK+
Sbjct: 101 TLENFKPISRVEAMAVITT--CQQAGLMT--TLVHCKEHFY--SICNCCRCCCVPYRLKH 154
Query: 216 GAGV 205
G+
Sbjct: 155 QYGI 158
>UniRef50_P84180 Cluster: Putative gustatory receptor 22b; n=3;
Drosophila melanogaster|Rep: Putative gustatory receptor
22b - Drosophila melanogaster (Fruit fly)
Length = 386
Score = 31.9 bits (69), Expect = 9.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 392 FVPSLLSDVWNVWLLIVACSVTSAACQ*TA 303
F SLL ++W+ WL I AC +T A TA
Sbjct: 288 FPNSLLINIWDFWLCIAACDLTEKAGDETA 317
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,565,632
Number of Sequences: 1657284
Number of extensions: 9112661
Number of successful extensions: 26224
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 25349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26218
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34156095254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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