Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3o07
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   1.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   1.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.8  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   9.0  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 568 HYWPLHHQLPRVPH 609
           H  P HHQLP  PH
Sbjct: 95  HQHPHHHQLPHHPH 108


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 568 HYWPLHHQLPRVPH 609
           H  P HHQLP  PH
Sbjct: 95  HQHPHHHQLPHHPH 108


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/53 (22%), Positives = 22/53 (41%)
 Frame = +2

Query: 47  ITRVPQPPXSGEXVFLTPPASLLPNPEGLELPIKSRLVPTEVYNSLFTYVRAV 205
           + +VPQPP         P A ++P P      +    +PT +  +   Y  ++
Sbjct: 595 LPQVPQPPAGSSLNLSHPSAGMVPQPPPPGSALGHPSIPTSLAAAAAAYSHSI 647


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -1

Query: 365 SYSRNRTLRKGGPSTSIGQS*RDYPRLKIVPMN 267
           S SR+R+  K   +    ++  D P +K VPMN
Sbjct: 615 SESRSRSTSKQRANAKTPETPSDQPLIKEVPMN 647


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 404 RSISAYHTGSLLTIPILHHLSPYQLC 481
           +S    H G++LT P++ H  P + C
Sbjct: 27  QSACVSHAGAILTAPLI-HCHPLKAC 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,270
Number of Sequences: 2352
Number of extensions: 14271
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)