Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3o07
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 30 6.7
BC002422-1|AAH02422.1| 1365|Homo sapiens SON protein protein. 30 6.7
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 30 6.7
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 30 6.7
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 30 6.7
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 30 6.7
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 30 6.7
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 30 6.7
AF005043-1|AAB61614.1| 976|Homo sapiens poly(ADP-ribose) glycoh... 30 6.7
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 30 6.7
AL132654-2|CAI21064.1| 851|Homo sapiens LPIN3 protein. 30 8.8
AL031667-3|CAI42978.1| 851|Homo sapiens LPIN3 protein. 30 8.8
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 SVTLLESF-VSVHSLLITRVPQPPXSGEXVFLTPP----ASLLPNPEGLELPIKSRLVPT 166
+VT+LES V+V + VP+PP E ++T P ++L P+ LE P S L P+
Sbjct: 228 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQPS 286
Query: 167 EVYNSLFTYVRAVRTLRVTDPSGFVRTQRQ 256
+ + V+ T+ V++P+ V Q Q
Sbjct: 287 MIVSEPSVSVQE-STVTVSEPAVTVSEQTQ 315
>BC002422-1|AAH02422.1| 1365|Homo sapiens SON protein protein.
Length = 1365
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 SVTLLESF-VSVHSLLITRVPQPPXSGEXVFLTPP----ASLLPNPEGLELPIKSRLVPT 166
+VT+LES V+V + VP+PP E ++T P ++L P+ LE P S L P+
Sbjct: 829 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQPS 887
Query: 167 EVYNSLFTYVRAVRTLRVTDPSGFVRTQRQ 256
+ + V+ T+ V++P+ V Q Q
Sbjct: 888 MIVSEPSVSVQE-STVTVSEPAVTVSEQTQ 916
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 SVTLLESF-VSVHSLLITRVPQPPXSGEXVFLTPP----ASLLPNPEGLELPIKSRLVPT 166
+VT+LES V+V + VP+PP E ++T P ++L P+ LE P S L P+
Sbjct: 1332 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQPS 1390
Query: 167 EVYNSLFTYVRAVRTLRVTDPSGFVRTQRQ 256
+ + V+ T+ V++P+ V Q Q
Sbjct: 1391 MIVSEPSVSVQE-STVTVSEPAVTVSEQTQ 1419
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 SVTLLESF-VSVHSLLITRVPQPPXSGEXVFLTPP----ASLLPNPEGLELPIKSRLVPT 166
+VT+LES V+V + VP+PP E ++T P ++L P+ LE P S L P+
Sbjct: 1372 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQPS 1430
Query: 167 EVYNSLFTYVRAVRTLRVTDPSGFVRTQRQ 256
+ + V+ T+ V++P+ V Q Q
Sbjct: 1431 MIVSEPSVSVQE-STVTVSEPAVTVSEQTQ 1459
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 SVTLLESF-VSVHSLLITRVPQPPXSGEXVFLTPP----ASLLPNPEGLELPIKSRLVPT 166
+VT+LES V+V + VP+PP E ++T P ++L P+ LE P S L P+
Sbjct: 1372 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQPS 1430
Query: 167 EVYNSLFTYVRAVRTLRVTDPSGFVRTQRQ 256
+ + V+ T+ V++P+ V Q Q
Sbjct: 1431 MIVSEPSVSVQE-STVTVSEPAVTVSEQTQ 1459
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 SVTLLESF-VSVHSLLITRVPQPPXSGEXVFLTPP----ASLLPNPEGLELPIKSRLVPT 166
+VT+LES V+V + VP+PP E ++T P ++L P+ LE P S L P+
Sbjct: 1372 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQPS 1430
Query: 167 EVYNSLFTYVRAVRTLRVTDPSGFVRTQRQ 256
+ + V+ T+ V++P+ V Q Q
Sbjct: 1431 MIVSEPSVSVQE-STVTVSEPAVTVSEQTQ 1459
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 SVTLLESF-VSVHSLLITRVPQPPXSGEXVFLTPP----ASLLPNPEGLELPIKSRLVPT 166
+VT+LES V+V + VP+PP E ++T P ++L P+ LE P S L P+
Sbjct: 1372 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQPS 1430
Query: 167 EVYNSLFTYVRAVRTLRVTDPSGFVRTQRQ 256
+ + V+ T+ V++P+ V Q Q
Sbjct: 1431 MIVSEPSVSVQE-STVTVSEPAVTVSEQTQ 1459
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 SVTLLESF-VSVHSLLITRVPQPPXSGEXVFLTPP----ASLLPNPEGLELPIKSRLVPT 166
+VT+LES V+V + VP+PP E ++T P ++L P+ LE P S L P+
Sbjct: 1053 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQPS 1111
Query: 167 EVYNSLFTYVRAVRTLRVTDPSGFVRTQRQ 256
+ + V+ T+ V++P+ V Q Q
Sbjct: 1112 MIVSEPSVSVQE-STVTVSEPAVTVSEQTQ 1140
>AF005043-1|AAB61614.1| 976|Homo sapiens poly(ADP-ribose)
glycohydrolase protein.
Length = 976
Score = 30.3 bits (65), Expect = 6.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 144 SNHDSCQLRCTILCLLMFEPFARFASLILPDSLGRNVKNQNIHGYNLQPGIISLTL 311
S D C+ RCT + + F R+ +P+ + R + N+ G+ L+PG+ S L
Sbjct: 809 SERDDCERRCTEIVAIDALHFRRYLDQFVPEKMRREL-NKAYCGF-LRPGVSSENL 862
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 30.3 bits (65), Expect = 6.7
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 2 SVTLLESF-VSVHSLLITRVPQPPXSGEXVFLTPP----ASLLPNPEGLELPIKSRLVPT 166
+VT+LES V+V + VP+PP E ++T P ++L P+ LE P S L P+
Sbjct: 1378 TVTVLESSTVTVLEPSVVTVPEPPVVAEPDYVTIPVPVVSALEPSVPVLE-PAVSVLQPS 1436
Query: 167 EVYNSLFTYVRAVRTLRVTDPSGFVRTQRQ 256
+ + V+ T+ V++P+ V Q Q
Sbjct: 1437 MIVSEPSVSVQE-STVTVSEPAVTVSEQTQ 1465
>AL132654-2|CAI21064.1| 851|Homo sapiens LPIN3 protein.
Length = 851
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 59 PQPPXSGEXVFLTPPASLLPNPEGLELPIKSRLVPTEVY 175
P+ +G L+ P L P P G++L KS L P ++Y
Sbjct: 163 PEELEAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDIY 201
>AL031667-3|CAI42978.1| 851|Homo sapiens LPIN3 protein.
Length = 851
Score = 29.9 bits (64), Expect = 8.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 59 PQPPXSGEXVFLTPPASLLPNPEGLELPIKSRLVPTEVY 175
P+ +G L+ P L P P G++L KS L P ++Y
Sbjct: 163 PEELEAGAESELSLPEKLRPEPPGVQLEEKSSLQPKDIY 201
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,986,575
Number of Sequences: 237096
Number of extensions: 2265851
Number of successful extensions: 4677
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4676
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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