Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3n24
         (241 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    26   0.16 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   2.6  

>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 98  DPVILKLTILTNYCAM*CSLFGSLY*LQTC 9
           DP+ILKL I+T Y      + G LY L TC
Sbjct: 303 DPLILKLFIITTY------ISGILYYLSTC 326


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = -2

Query: 198 LNSKYMYN*LNSIFLYLQFSFCSANVIASDNGTRPCNIKANN 73
           LNS ++Y   +S  L  Q S    N   +++ T   N+  NN
Sbjct: 353 LNSSHIYTTPSSNSLSTQHSHSPVNGYGNNHPTGGSNLPGNN 394


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,271
Number of Sequences: 2352
Number of extensions: 1969
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11422398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)