Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3n15
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   5.7  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   5.7  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   5.7  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   7.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 312 ALSLANNGLDVKIISYVETDPLPEVLNN 395
           A S+A  GLD+K +++V    LP+ +++
Sbjct: 479 ATSVAARGLDIKNVNHVVNYDLPKSIDD 506


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +2

Query: 5   KICELLIVYVVNLLFICRYLPTYLSR 82
           K+ ++L++  V+ +F+C  LP+Y+ R
Sbjct: 370 KVTKMLLI--VSTVFVCLNLPSYIVR 393


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 547 RPPYHPCQSFVCIAWFQRP 603
           RPP+HP   F    W+ RP
Sbjct: 93  RPPWHPRPPFGGRPWWLRP 111


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +2

Query: 5   KICELLIVYVVNLLFICRYLPTYLSR 82
           K+ ++L++  V+ +F+C  LP+Y+ R
Sbjct: 319 KVTKMLLI--VSSVFVCLNLPSYVMR 342


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,172
Number of Sequences: 2352
Number of extensions: 16878
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)