Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3n15
         (747 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031095-1|AAH31095.1|  464|Homo sapiens asparagine-linked glyco...   142   1e-33
BC004402-1|AAH04402.1|  464|Homo sapiens asparagine-linked glyco...   142   1e-33
AY359073-1|AAQ89432.1|  472|Homo sapiens mannosyltransferase pro...   142   1e-33
AK075373-1|BAC11576.1|  464|Homo sapiens rase).  protein.             142   1e-33
AB019038-1|BAA90748.1|  464|Homo sapiens beta-1,4 mannosyltransf...   142   1e-33

>BC031095-1|AAH31095.1|  464|Homo sapiens asparagine-linked
           glycosylation 1 homolog (S. cerevisiae,
           beta-1,4-mannosyltran protein.
          Length = 464

 Score =  142 bits (344), Expect = 1e-33
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 29  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 88

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPVFRLYCMVS 596
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V      + 
Sbjct: 89  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLC 148

Query: 597 KAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFFGQSSHFNLCVT 740
            ++ VIDWHNY YSIM +   P+H LV +A+  E+FFG+ SH NLCVT
Sbjct: 149 GSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVT 196


>BC004402-1|AAH04402.1|  464|Homo sapiens asparagine-linked
           glycosylation 1 homolog (S. cerevisiae,
           beta-1,4-mannosyltran protein.
          Length = 464

 Score =  142 bits (344), Expect = 1e-33
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 29  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 88

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPVFRLYCMVS 596
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V      + 
Sbjct: 89  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLC 148

Query: 597 KAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFFGQSSHFNLCVT 740
            ++ VIDWHNY YSIM +   P+H LV +A+  E+FFG+ SH NLCVT
Sbjct: 149 GSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVT 196


>AY359073-1|AAQ89432.1|  472|Homo sapiens mannosyltransferase
           protein.
          Length = 472

 Score =  142 bits (344), Expect = 1e-33
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 37  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 96

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPVFRLYCMVS 596
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V      + 
Sbjct: 97  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLC 156

Query: 597 KAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFFGQSSHFNLCVT 740
            ++ VIDWHNY YSIM +   P+H LV +A+  E+FFG+ SH NLCVT
Sbjct: 157 GSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVT 204


>AK075373-1|BAC11576.1|  464|Homo sapiens rase).  protein.
          Length = 464

 Score =  142 bits (344), Expect = 1e-33
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 29  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 88

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPVFRLYCMVS 596
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V      + 
Sbjct: 89  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLC 148

Query: 597 KAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFFGQSSHFNLCVT 740
            ++ VIDWHNY YSIM +   P+H LV +A+  E+FFG+ SH NLCVT
Sbjct: 149 GSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVT 196


>AB019038-1|BAA90748.1|  464|Homo sapiens beta-1,4
           mannosyltransferase protein.
          Length = 464

 Score =  142 bits (344), Expect = 1e-33
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
 Frame = +3

Query: 240 GNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKL 419
           G   +    VVLGD+GRSPRMQYHALSLA +G  V ++ +  + P  E+L N  I ++ L
Sbjct: 29  GRAARHVVAVVLGDVGRSPRMQYHALSLAMHGFSVTLLGFCNSKPHDELLQNNRIQIVGL 88

Query: 420 HPFE-LKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPVFRLYCMVS 596
              + L  GP V +Y  K + Q++ L++ L       Y+  QNPP +PS+ V      + 
Sbjct: 89  TELQSLAVGPRVFQYGVKVVLQAMYLLWKLMWREPGAYIFLQNPPGLPSIAVCWFVGCLC 148

Query: 597 KAQFVIDWHNYAYSIMAMTLEPDHMLVRMARSTERFFGQSSHFNLCVT 740
            ++ VIDWHNY YSIM +   P+H LV +A+  E+FFG+ SH NLCVT
Sbjct: 149 GSKLVIDWHNYGYSIMGLVHGPNHPLVLLAKWYEKFFGRLSHLNLCVT 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,513,153
Number of Sequences: 237096
Number of extensions: 2488550
Number of successful extensions: 4099
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4092
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)