Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3n15
         (747 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p pro...   148   9e-36
AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-P...   148   9e-36
BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p pro...    32   0.72 
AY089431-1|AAL90169.1|  358|Drosophila melanogaster AT25123p pro...    32   0.95 
AE013599-3548|AAF46960.2|  358|Drosophila melanogaster CG3215-PA...    31   1.7  
AY122171-1|AAM52683.1| 1653|Drosophila melanogaster LD29171p pro...    29   5.1  
AE014134-2399|AAN10848.1| 1614|Drosophila melanogaster CG7578-PB...    29   5.1  
AE014134-2398|AAF53331.2| 1653|Drosophila melanogaster CG7578-PA...    29   5.1  

>AY118918-1|AAM50778.1|  446|Drosophila melanogaster LD22559p
           protein.
          Length = 446

 Score =  148 bits (358), Expect = 9e-36
 Identities = 71/166 (42%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
 Frame = +3

Query: 249 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPF 428
           ++ A V+VLGDIGRSPRMQYHA SL      V +I Y+ET PL E+  +P   + +L   
Sbjct: 8   KRNACVIVLGDIGRSPRMQYHAQSLLEENYHVDMIGYLETRPLEELTQHPRCRIHELTAV 67

Query: 429 ELKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPVFRLYCMVSKAQF 608
            +      L+ + K  WQ++SL+  L   GR  +LL QNPP IP+L V  LYC V++ + 
Sbjct: 68  PVTNLTPKLRLLFKAFWQTLSLLMALISIGRPSFLLVQNPPGIPTLIVCYLYCAVTRTKL 127

Query: 609 VIDWHNYAYSIMAMTLEPDHM--LVRMARSTERFFGQSSHFNLCVT 740
            IDWHNY Y+++A+ +       L+R+ R  ER+FG  +H + CVT
Sbjct: 128 AIDWHNYTYTVLALGMSKGEQSPLIRLVRRLERYFGSKAHTHFCVT 173


>AE014297-2416|AAF55475.1|  446|Drosophila melanogaster CG18012-PA
           protein.
          Length = 446

 Score =  148 bits (358), Expect = 9e-36
 Identities = 71/166 (42%), Positives = 101/166 (60%), Gaps = 2/166 (1%)
 Frame = +3

Query: 249 RKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVLNNPHITVIKLHPF 428
           ++ A V+VLGDIGRSPRMQYHA SL      V +I Y+ET PL E+  +P   + +L   
Sbjct: 8   KRNACVIVLGDIGRSPRMQYHAQSLLEENYHVDMIGYLETRPLEELTQHPRCRIHELTAV 67

Query: 429 ELKWGPVVLKYIAKTLWQSVSLMFTLFLTGRCDYLLGQNPPAIPSLPVFRLYCMVSKAQF 608
            +      L+ + K  WQ++SL+  L   GR  +LL QNPP IP+L V  LYC V++ + 
Sbjct: 68  PVTNLTPKLRLLFKAFWQTLSLLMALISIGRPSFLLVQNPPGIPTLIVCYLYCAVTRTKL 127

Query: 609 VIDWHNYAYSIMAMTLEPDHM--LVRMARSTERFFGQSSHFNLCVT 740
            IDWHNY Y+++A+ +       L+R+ R  ER+FG  +H + CVT
Sbjct: 128 AIDWHNYTYTVLALGMSKGEQSPLIRLVRRLERYFGSKAHTHFCVT 173


>BT001681-1|AAN71436.1|  168|Drosophila melanogaster RE56164p
           protein.
          Length = 168

 Score = 32.3 bits (70), Expect = 0.72
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = +3

Query: 210 SGFKEALMMLGNVRKVAKVVVLGDIGRSPRMQYHALSLANNGLDVKIISYVETDPLPEVL 389
           SGF+  ++   +++ VA  +VL  I  S   +        + +D   I  V   P PE L
Sbjct: 4   SGFRSIMLRPSSLQAVAIAIVL--ISSSASAEVVNFEPCPDSVDTCTIQQVRVSPCPEAL 61

Query: 390 NNPHITVIKLHPFELKW 440
           NN    + + H  E+ +
Sbjct: 62  NNAACNIRRKHNSEMSF 78


>AY089431-1|AAL90169.1|  358|Drosophila melanogaster AT25123p
           protein.
          Length = 358

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
 Frame = +3

Query: 321 LANNGLDVKIISYV-----ETDPLPEVLNNPHITVIKLHPFELKWGPVVLKYIAKTLWQS 485
           L +  LD K+  YV     E   L E++N  HI    +  FEL    V +  I  T   +
Sbjct: 27  LNSQTLDEKVTMYVYEEIVEGRKLTEIINTTHINSKYMPNFELPPNIVAVDDIVTTARDA 86

Query: 486 VSLMFTL---FLTGRCDYLLGQNPPAIPSLPVFRLYCMVSKAQFVI 614
             ++F +   F++  C  LLG+  P   ++ + + +      QFV+
Sbjct: 87  DIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFVL 132


>AE013599-3548|AAF46960.2|  358|Drosophila melanogaster CG3215-PA
           protein.
          Length = 358

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
 Frame = +3

Query: 321 LANNGLDVKIISYV-----ETDPLPEVLNNPHITVIKLHPFELKWGPVVLKYIAKTLWQS 485
           L +  LD K+  YV     E   L E++N  HI    +  FEL    V +  I  T   +
Sbjct: 27  LNSQTLDEKVPMYVYEEIVEGRKLTEIINTTHINSKYMPNFELPPNIVAVDDIVTTARDA 86

Query: 486 VSLMFTL---FLTGRCDYLLGQNPPAIPSLPVFRLYCMVSKAQFVI 614
             ++F +   F++  C  LLG+  P   ++ + + +      QFV+
Sbjct: 87  DIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFVL 132


>AY122171-1|AAM52683.1| 1653|Drosophila melanogaster LD29171p
           protein.
          Length = 1653

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 516 GRCDYLLGQNPPAIPSLPVFRLYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARST 695
           GR    LG NP    S+ +  L C+VS  + +++W    Y    M + P  M V+   ST
Sbjct: 485 GRQALELGANPMQEKSMRIRGLECLVSILKCMVEWSKDLYVNPNMPVPP--MQVQSPTST 542

Query: 696 ER 701
           E+
Sbjct: 543 EQ 544


>AE014134-2399|AAN10848.1| 1614|Drosophila melanogaster CG7578-PB,
           isoform B protein.
          Length = 1614

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 516 GRCDYLLGQNPPAIPSLPVFRLYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARST 695
           GR    LG NP    S+ +  L C+VS  + +++W    Y    M + P  M V+   ST
Sbjct: 485 GRQALELGANPMQEKSMRIRGLECLVSILKCMVEWSKDLYVNPNMPVPP--MQVQSPTST 542

Query: 696 ER 701
           E+
Sbjct: 543 EQ 544


>AE014134-2398|AAF53331.2| 1653|Drosophila melanogaster CG7578-PA,
           isoform A protein.
          Length = 1653

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 516 GRCDYLLGQNPPAIPSLPVFRLYCMVSKAQFVIDWHNYAYSIMAMTLEPDHMLVRMARST 695
           GR    LG NP    S+ +  L C+VS  + +++W    Y    M + P  M V+   ST
Sbjct: 485 GRQALELGANPMQEKSMRIRGLECLVSILKCMVEWSKDLYVNPNMPVPP--MQVQSPTST 542

Query: 696 ER 701
           E+
Sbjct: 543 EQ 544


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,306,093
Number of Sequences: 53049
Number of extensions: 759866
Number of successful extensions: 1809
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)