Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3n10
         (230 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DAE739 Cluster: hypothetical protein Rgryl_01001...    33   1.6  
UniRef50_Q9NIM9 Cluster: Seroreactive antigen BMN1-11; n=1; Babe...    33   1.6  
UniRef50_Q04QE8 Cluster: Putative uncharacterized protein; n=2; ...    32   2.2  
UniRef50_Q16GK2 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_Q9NIN3 Cluster: Seroreactive antigen BMN1-8 precursor; ...    31   3.8  
UniRef50_O43048 Cluster: GTPase activating protein; n=2; Schizos...    31   3.8  

>UniRef50_UPI0000DAE739 Cluster: hypothetical protein
           Rgryl_01001113; n=1; Rickettsiella grylli|Rep:
           hypothetical protein Rgryl_01001113 - Rickettsiella
           grylli
          Length = 290

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +2

Query: 53  NIFTFMEIIHVS-SKLVRISFVFVMRVA**NHNNVFLTFFCSGFFAYYNYVYKISNNKKK 229
           NI  F+  I  S S L+  +F +V      N NN  + FF SG+  Y+N   KI + K K
Sbjct: 144 NIVRFLNKISKSNSPLILKNFKWVFSSEKPNANNHGIHFFISGYVPYFNKALKILDKKYK 203


>UniRef50_Q9NIM9 Cluster: Seroreactive antigen BMN1-11; n=1; Babesia
           microti|Rep: Seroreactive antigen BMN1-11 - Babesia
           microti
          Length = 292

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   DNCQTCQRSHVTNTTGLNIFTFMEIIHVSSKLVRISFVFVMRVA**NHNNVFLTFFC--S 175
           D  +  + SH      +    ++      +KL  I  V ++ +    HNN  L  F   +
Sbjct: 131 DKSEQNKLSHPNKIDKIKFSDYIIEFDDDAKLPTIGTVNIISIITCKHNNPVLVEFIVST 190

Query: 176 GFFAYYNYVYKISNNKKK 229
             + YYNY Y ++NN  K
Sbjct: 191 EIYCYYNYFYSMNNNTNK 208


>UniRef50_Q04QE8 Cluster: Putative uncharacterized protein; n=2;
           Leptospira borgpetersenii serovar Hardjo-bovis|Rep:
           Putative uncharacterized protein - Leptospira
           borgpetersenii serovar Hardjo-bovis (strain JB197)
          Length = 117

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = -3

Query: 180 KPEQKNVKKTLL*FHHATLITNTKLIRTNFDETCIISINVKIFN 49
           +P+ K ++   L F H  +ITN   I  NF +   I  N KIFN
Sbjct: 2   QPKSKKIQGRFLIFTHVLIITNLIKIYKNFVQKYFIFNNQKIFN 45


>UniRef50_Q16GK2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 191

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -2

Query: 73  LHKCKNIQSSCVCNVAPLTRLAIV 2
           LH CKNI++  +CN+ P  R AI+
Sbjct: 103 LHSCKNIENGEICNLEPEVRRAIL 126


>UniRef50_Q9NIN3 Cluster: Seroreactive antigen BMN1-8 precursor;
           n=2; Babesia microti|Rep: Seroreactive antigen BMN1-8
           precursor - Babesia microti
          Length = 592

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +2

Query: 2   DNCQTCQRSHVTNTTGLNIFTFMEIIHVSSKLVRISFVFVMRVA**NHNN-VFLTFFCSG 178
           D  Q  + SH      +    ++      +KL  I  V  + +    HNN V + F CS 
Sbjct: 262 DKSQQNELSHPNKIYKIKFSDYIIEFDDDAKLTTIGTVEDITIYTCKHNNPVLIRFSCSI 321

Query: 179 FFAYYNYVYKISNNKKK 229
              YY Y Y ++NN  K
Sbjct: 322 EKYYYYYFYSMNNNTNK 338



 Score = 31.5 bits (68), Expect = 3.8
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +2

Query: 2   DNCQTCQRSHVTNTTGLNIFTFMEIIHVSSKLVRISFVFVMRVA**NHNN-VFLTFFCSG 178
           D  Q  + SH      +    ++      +KL  I  V  + +    HNN V + F CS 
Sbjct: 442 DKSQQNELSHPNKIYKIKFSDYIIEFDDDAKLTTIGTVEDITIYTCKHNNPVLIRFSCSI 501

Query: 179 FFAYYNYVYKISNNKKK 229
              YY Y Y ++NN  K
Sbjct: 502 EKYYYYYFYSMNNNTNK 518


>UniRef50_O43048 Cluster: GTPase activating protein; n=2;
           Schizosaccharomyces pombe|Rep: GTPase activating protein
           - Schizosaccharomyces pombe (Fission yeast)
          Length = 834

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 10  PNVSTEPRYKHNWIEYFYIYGDNTCLIKIS 99
           P +S E      W EYF +YG N  LI++S
Sbjct: 182 PRISRERAKLRMWKEYFLLYGANLSLIRVS 211


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,837,829
Number of Sequences: 1657284
Number of extensions: 2738048
Number of successful extensions: 6414
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6411
length of database: 575,637,011
effective HSP length: 55
effective length of database: 484,486,391
effective search space used: 10174214211
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)