Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3n06
         (310 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    31   0.004
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   5.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   5.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   6.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.7 bits (66), Expect = 0.004
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = -3

Query: 212 YYLFSFLIYYYNC*YLIFTVYLHSYSHILSNLHHXTISYHMLIYTYDIRNHMCVY 48
           + LF   IYY+   ++IFT++L  Y  ++  L      Y  +++T  +   +C+Y
Sbjct: 205 HLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIY 259



 Score = 27.1 bits (57), Expect = 0.045
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 203 FSFLIYYYNC*YLIFTVYL 147
           F   IYY+ C ++IFTV+L
Sbjct: 142 FLLCIYYFYCAFIIFTVHL 160



 Score = 26.6 bits (56), Expect = 0.059
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 212 YYLFSFLIYYYNC*YLIFTVY-LHSYSHILSNLH 114
           + LF   IY++ C ++IFT++ L   + I  N+H
Sbjct: 159 HLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMH 192



 Score = 24.2 bits (50), Expect = 0.32
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -3

Query: 212 YYLFSFL--IYYYNC*YLIFTVYL 147
           YY F  L  +YY+   ++IFTV+L
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHL 127



 Score = 22.2 bits (45), Expect = 1.3
 Identities = 9/44 (20%), Positives = 22/44 (50%)
 Frame = -3

Query: 218 VAYYLFSFLIYYYNC*YLIFTVYLHSYSHILSNLHHXTISYHML 87
           + Y+ ++F+++  +   L+  +Y   Y H+L        + H+L
Sbjct: 238 IYYFYYAFILFTVHL-LLLVCIYYFYYMHLLFCCAFIIFTMHLL 280



 Score = 21.8 bits (44), Expect = 1.7
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 201 FVSXILLQLLISNFYSLFTFLFAYLI*LTSXYYF 100
           FV  +   L I  FY  F     +L+ L   Y+F
Sbjct: 136 FVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHF 169



 Score = 20.2 bits (40), Expect = 5.2
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = -2

Query: 201 FVSXILLQLLISNFYSLFTFLFAYLI*LTSXYYFLSYVNIYL*YT*SYVCLLXIFTXDFT 22
           F +  LL LL  ++++L      +L+ L   YYF S   I+  +   Y  L+ +    + 
Sbjct: 188 FFNMHLLFLLCLDYFTL------HLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYF 241

Query: 21  NYIF 10
            Y F
Sbjct: 242 YYAF 245



 Score = 19.4 bits (38), Expect = 9.0
 Identities = 9/43 (20%), Positives = 19/43 (44%)
 Frame = -3

Query: 215 AYYLFSFLIYYYNC*YLIFTVYLHSYSHILSNLHHXTISYHML 87
           A+ +F+  + +  C Y  F  ++    H+L        + H+L
Sbjct: 152 AFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLL 194


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 137 NKNVNKL*KLDINNCNSIXETKIDNKQL 220
           NK +N L +    N     ETK  NKQL
Sbjct: 472 NKQINNLIEYFQKNKIGPVETKGTNKQL 499


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 137 NKNVNKL*KLDINNCNSIXETKIDNKQL 220
           NK +N L +    N     ETK  NKQL
Sbjct: 197 NKQINNLIEYFQKNKIGPVETKGTNKQL 224


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 165 NFYSLFTFLFAYLI*LTSXYYF 100
           NF     F+F ++  LT   YF
Sbjct: 440 NFRKKLDFIFTFITLLTIGLYF 461


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,088
Number of Sequences: 336
Number of extensions: 821
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)