Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3n05
         (439 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023261-1|AAY55677.1|  110|Drosophila melanogaster IP02710p pro...    95   5e-20
AE014134-1428|AAF52619.1|  110|Drosophila melanogaster CG8396-PA...    95   5e-20
U18971-1|AAC46989.1|   98|Drosophila melanogaster p31A protein.        71   9e-13
AE014134-105|AAF51496.1|  549|Drosophila melanogaster CG13691-PA...    29   3.7  
AE014297-3189|AAF56024.1|  356|Drosophila melanogaster CG6937-PA...    28   6.4  

>BT023261-1|AAY55677.1|  110|Drosophila melanogaster IP02710p
           protein.
          Length = 110

 Score = 94.7 bits (225), Expect = 5e-20
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 8/95 (8%)
 Frame = +2

Query: 122 GPEDRNPPAEKKAKMADRTNDKEP--------TWVLQGKKLLKVREFKGKVYVDIREFYE 277
           GP+DR  PA KKAK +D  N            +W L+G + +++ EF+G+  VDIREFY+
Sbjct: 16  GPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYD 75

Query: 278 KNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSS 382
           K G++LPGKKGISL+  QW+KLL V EEV   + +
Sbjct: 76  KGGQILPGKKGISLSLIQWKKLLEVAEEVTRAIEN 110


>AE014134-1428|AAF52619.1|  110|Drosophila melanogaster CG8396-PA
           protein.
          Length = 110

 Score = 94.7 bits (225), Expect = 5e-20
 Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 8/95 (8%)
 Frame = +2

Query: 122 GPEDRNPPAEKKAKMADRTNDKEP--------TWVLQGKKLLKVREFKGKVYVDIREFYE 277
           GP+DR  PA KKAK +D  N            +W L+G + +++ EF+G+  VDIREFY+
Sbjct: 16  GPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYD 75

Query: 278 KNGELLPGKKGISLTPEQWRKLLSVGEEVNETVSS 382
           K G++LPGKKGISL+  QW+KLL V EEV   + +
Sbjct: 76  KGGQILPGKKGISLSLIQWKKLLEVAEEVTRAIEN 110


>U18971-1|AAC46989.1|   98|Drosophila melanogaster p31A protein.
          Length = 98

 Score = 70.5 bits (165), Expect = 9e-13
 Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 8/71 (11%)
 Frame = +2

Query: 122 GPEDRNPPAEKKAKMADRTNDKEP--------TWVLQGKKLLKVREFKGKVYVDIREFYE 277
           GP+DR  PA KKAK +D  N            +W L+G + +++ EF+G+  VDIREFY+
Sbjct: 16  GPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYD 75

Query: 278 KNGELLPGKKG 310
           K G++LPGKKG
Sbjct: 76  KGGQILPGKKG 86


>AE014134-105|AAF51496.1|  549|Drosophila melanogaster CG13691-PA
           protein.
          Length = 549

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 191 PTWVLQGKKLLKVREFKGKVYVD 259
           PTW+++G   LK+R    +VYVD
Sbjct: 99  PTWLMEGVWQLKMRALTQRVYVD 121


>AE014297-3189|AAF56024.1|  356|Drosophila melanogaster CG6937-PA
           protein.
          Length = 356

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 140 PPAEKKAKMADRTNDKEPTWVLQGKKL 220
           PP +KK K+AD+   K  T  +Q KK+
Sbjct: 294 PPKQKKTKLADKLKRKPGTGGVQKKKI 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,463,905
Number of Sequences: 53049
Number of extensions: 268299
Number of successful extensions: 855
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)