Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3n01
(728 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10348 Cluster: Uncharacterized 44.3 kDa protein; n=14;... 380 e-104
UniRef50_Q9YMM0 Cluster: LdOrf-107 peptide; n=14; Nucleopolyhedr... 248 1e-64
UniRef50_Q287K6 Cluster: ORF-66; n=4; Nucleopolyhedrovirus|Rep: ... 209 5e-53
UniRef50_Q0IL08 Cluster: ORF111; n=2; Leucania separata nuclear ... 198 9e-50
UniRef50_A5IZP8 Cluster: Putative uncharacterized protein orf46;... 105 1e-21
UniRef50_Q9PYZ0 Cluster: ORF53; n=1; Xestia c-nigrum granuloviru... 97 3e-19
UniRef50_Q7T9W9 Cluster: ORF_46; n=5; Granulovirus|Rep: ORF_46 -... 86 7e-16
UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:... 77 6e-13
UniRef50_Q8JS09 Cluster: Putative uncharacterized protein PhopGV... 69 1e-10
UniRef50_Q6JK90 Cluster: Putative uncharacterized protein; n=3; ... 40 0.062
UniRef50_Q23PW6 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_A7E511 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q7QQJ3 Cluster: GLP_238_5046_9479; n=1; Giardia lamblia... 34 4.1
UniRef50_A0CSZ2 Cluster: Chromosome undetermined scaffold_261, w... 34 4.1
>UniRef50_O10348 Cluster: Uncharacterized 44.3 kDa protein; n=14;
Nucleopolyhedrovirus|Rep: Uncharacterized 44.3 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 390
Score = 380 bits (935), Expect = e-104
Identities = 174/238 (73%), Positives = 198/238 (83%), Gaps = 4/238 (1%)
Frame = +1
Query: 25 MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNS 204
MECPFQI+VC+SDRFFAFP+NLVEPQ+ VGN+ ENL+VYVPTD D LY++K+ FP+F S
Sbjct: 1 MECPFQIKVCVSDRFFAFPYNLVEPQTAVGNRPTENLVVYVPTDADVLYVEKRNFPRFRS 60
Query: 205 VLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMI 384
VLVY+HE D N +S+SPKKT +ATIVYWNPL+PITEIGAGETRVFSVLLTNNLFYCNT+I
Sbjct: 61 VLVYKHEQDYNGNSQSPKKTGAATIVYWNPLVPITEIGAGETRVFSVLLTNNLFYCNTLI 120
Query: 385 IQHENPKCPIEFTYPETDMQSACSALLKNRNGQSV----PPPIKSNLRPIACEIPLSHFK 552
+ HENP CPIEFTYP +MQ C L R + PP S LRPI CE+PL+HFK
Sbjct: 121 VHHENPTCPIEFTYPGLEMQPVCKLLSGARKSVDMRAHAPPLSYSELRPINCELPLAHFK 180
Query: 553 ELVESNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLN 726
EL ES+ FLLCFNLET TMVKIL LKRIFCIFQYRK PARYVINLPHEE+D+LYNKLN
Sbjct: 181 ELTESDKFLLCFNLETPTMVKILCLKRIFCIFQYRKLPARYVINLPHEEVDSLYNKLN 238
>UniRef50_Q9YMM0 Cluster: LdOrf-107 peptide; n=14;
Nucleopolyhedrovirus|Rep: LdOrf-107 peptide - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 366
Score = 248 bits (606), Expect = 1e-64
Identities = 123/233 (52%), Positives = 158/233 (67%), Gaps = 2/233 (0%)
Frame = +1
Query: 31 CPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVL 210
CP I+VCISD F AFP+ V PQ+DVGN L+ NL+VYVPTD+D Y+D + P F SVL
Sbjct: 12 CPLNIKVCISDYFVAFPYEYVVPQNDVGNALVLNLVVYVPTDEDIRYVDASKLPAFQSVL 71
Query: 211 VYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMIIQ 390
VYRHE ++R PKK +AT+VYWNP++PI E+G G+TRVFSVLLTN+LF+CNTMII
Sbjct: 72 VYRHELGDASETRVPKKNTNATVVYWNPILPIGEVGVGDTRVFSVLLTNDLFFCNTMIIG 131
Query: 391 HENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSHFKEL--VE 564
H+ CP+EF T++ L PI E PL + K L +
Sbjct: 132 HDIVSCPVEF---RTNVN-------------------YKKLTPIEAEDPLFNLKRLRDDD 169
Query: 565 SNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKL 723
+NDFLLCF LET +MVKILS+KR+ CIF++R+ PARY I LP E+D+++NKL
Sbjct: 170 NNDFLLCFKLETPSMVKILSVKRLMCIFEFRRVPARYAIYLPDREVDSIFNKL 222
>UniRef50_Q287K6 Cluster: ORF-66; n=4; Nucleopolyhedrovirus|Rep:
ORF-66 - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 356
Score = 209 bits (511), Expect = 5e-53
Identities = 105/235 (44%), Positives = 146/235 (62%), Gaps = 2/235 (0%)
Frame = +1
Query: 25 MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNS 204
M CPF I V ISDR+FAFP+N V PQ D+G + NL+VYVPT++D ++DK F F+S
Sbjct: 1 MTCPFNISVHISDRYFAFPYNRVRPQKDLGGAYVRNLVVYVPTEEDIKFVDKTYFNDFSS 60
Query: 205 VLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMI 384
VLV+RHE ++SR+P K + TIVYWNP++PITEIG GET V+SVLLT++LFYC TM+
Sbjct: 61 VLVHRHEWSERVESRAPTKNGAVTIVYWNPILPITEIGVGETCVYSVLLTDSLFYCKTMV 120
Query: 385 IQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSHFKELVE 564
+ P CPI Q + ++ + PIA E PL F + +
Sbjct: 121 VDSNTPMCPI----------------------QIMTKTLRDYI-PIAGETPLDKFDVMTD 157
Query: 565 --SNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKL 723
N+FL+CF ET V+ L++KRI IF+YRK PAR+ + ++ ++Y +L
Sbjct: 158 DAKNNFLICFLRETPKRVRQLNVKRILTIFEYRKTPARFAYEMSDADVQDIYVEL 212
>UniRef50_Q0IL08 Cluster: ORF111; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: ORF111 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 364
Score = 198 bits (484), Expect = 9e-50
Identities = 101/235 (42%), Positives = 149/235 (63%), Gaps = 2/235 (0%)
Frame = +1
Query: 25 MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPK--F 198
M CP I+V IS++F FP PQ+DV N + NLIVYVPT++D +++++Q F
Sbjct: 1 MACPVNIKVYISEQFVTFPFQFAIPQADVANVPVRNLIVYVPTEEDVQFVEREQLLNTVF 60
Query: 199 NSVLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNT 378
++VLVYRHE+ I++R+P+K +ATIVYWNP+MPITE+G G+TRVFS+LLTNNL+ CNT
Sbjct: 61 DTVLVYRHENVGAIEARAPRKNQNATIVYWNPVMPITEVGVGDTRVFSILLTNNLYSCNT 120
Query: 379 MIIQHENPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSHFKEL 558
+++ ++ P CPIE+ + E + + N N P N +
Sbjct: 121 IVLDNDTPLCPIEY-HREYHPVDLTNRIDLNGNDPLYDRPAIMNPNNV------------ 167
Query: 559 VESNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKL 723
+F++ F++ TS M+KIL++KRI +F RK ARY IN+ EID++Y+KL
Sbjct: 168 ----NFIISFDMSTSDMIKILNIKRILTMFSMRKVRARYAINMADAEIDDIYSKL 218
>UniRef50_A5IZP8 Cluster: Putative uncharacterized protein orf46;
n=1; Spodoptera litura granulovirus|Rep: Putative
uncharacterized protein orf46 - Spodoptera litura
granulovirus
Length = 358
Score = 105 bits (252), Expect = 1e-21
Identities = 72/239 (30%), Positives = 120/239 (50%), Gaps = 5/239 (2%)
Frame = +1
Query: 25 MECPFQIQVCISDRFFAFPHNLVE--PQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKF 198
M CPF I+V ISD F FP++++ P G+ + +L +YVP+ +D I+K ++
Sbjct: 1 MSCPFNIKVYISDAFVVFPYDMISTIPMDVGGSASVTDLTIYVPSYEDIAVINKDTIQRY 60
Query: 199 NSVLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNT 378
+ +H + D+ KT + IVYWN + IT G G T+VFSV+L++NLF C
Sbjct: 61 GYTDIKVKKHVNHTDA---DKTPTRIIVYWNVISLITVTGVGVTKVFSVVLSDNLFECGQ 117
Query: 379 MII--QHENPKCPIEFTYPETDMQSACSALLKNR-NGQSVPPPIKSNLRPIACEIPLSHF 549
+ + + CP++ Y +SA +L+ G SV + L P
Sbjct: 118 LNVLDTQGDLNCPLQIDYAFFPTESANRTILRGEYAGDSV--EMAKALDP---------- 165
Query: 550 KELVESNDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLN 726
+++++CF ET VKIL++KR + R + A++ I L +E+ + +LN
Sbjct: 166 ----AYDNYVICFKKETPMGVKILNVKRYMILLNQRSKKAKFAIYLNCDELHIIQKELN 220
>UniRef50_Q9PYZ0 Cluster: ORF53; n=1; Xestia c-nigrum
granulovirus|Rep: ORF53 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 353
Score = 97.5 bits (232), Expect = 3e-19
Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 8/233 (3%)
Frame = +1
Query: 25 MECPFQIQVCISDRFFAFPHNLVE-PQSDVGNK-LIENLIVYVPTDDDRLYIDKK--QFP 192
M CP ++V I+D + FP+ ++ P D G + + +YVPT +D ++K Q
Sbjct: 1 MSCPANVKVFIADYYVTFPYESIQNPPRDAGGAGTVTAITIYVPTFEDVHAVNKSLVQRK 60
Query: 193 KFNSVLVYRHE-HDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFY 369
+ V V +H D +D + +VYWN + I ++G G T+V++V+L++NL+
Sbjct: 61 GYTDVRVEKHTAQDTTVDE-------ARVVVYWNVISHIKKLGYGTTQVYNVVLSDNLYT 113
Query: 370 CNTMIIQHENP-KCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSH 546
C+ + I P CP+ Y D +S C P+ P H
Sbjct: 114 CDNVTITSLMPTSCPMHIEYCAVDAKSQC---------------------PLDGSAPADH 152
Query: 547 -FKELVES-NDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEE 699
+E ++ N F + F ET +KIL++KR+ +F ++ P +Y INL HEE
Sbjct: 153 TVREYIKKYNSFTIHFPRETPMGIKILNVKRLLILFSSKETPVKYSINLCHEE 205
>UniRef50_Q7T9W9 Cluster: ORF_46; n=5; Granulovirus|Rep: ORF_46 -
Adoxophyes orana granulovirus (AoGV)
Length = 349
Score = 86.2 bits (204), Expect = 7e-16
Identities = 68/236 (28%), Positives = 115/236 (48%), Gaps = 4/236 (1%)
Frame = +1
Query: 31 CPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFP-KFNSV 207
C I+V ++D F FP+ ++ + L V+VPT D IDK +F F V
Sbjct: 4 CSNNIRVYVNDSFVYFPYERIKRNPNY------YLTVFVPTYADEEVIDKSRFTGMFKIV 57
Query: 208 LVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMII 387
V ++ N D + +VYWN ++PI +G G T V++V+L++NL+ CN ++I
Sbjct: 58 NVIKYVS--NFDESKYSSVSKNLVVYWNVIVPINILGVGTTDVYNVVLSDNLYKCNNIVI 115
Query: 388 QHEN-PKCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSHFKELVE 564
++ CP++ Y D C +K L + EI K L
Sbjct: 116 ENTTFVNCPLQVDY---DPSMIC---------------LKGELVGYSSEIN----KALNN 153
Query: 565 SND-FLLCFNLETSTMVKILSLKRIFCIFQ-YRKQPARYVINLPHEEIDNLYNKLN 726
+N+ F++ F+ +T VKIL+ KR F + YR P + I L ++E++ ++ +L+
Sbjct: 154 ANNKFIIHFDKDTPMGVKILNTKRYFILLSVYRSSPVKLCIYLTYDELNVVHKELS 209
>UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:
PxORF43 peptide - Plutella xylostella granulovirus
Length = 414
Score = 76.6 bits (180), Expect = 6e-13
Identities = 62/233 (26%), Positives = 113/233 (48%), Gaps = 4/233 (1%)
Frame = +1
Query: 40 QIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPK--FNSVLV 213
+I V +SD F FP++LV V L+VYVPT +D + K+ K + V V
Sbjct: 72 KIHVHVSDSFVNFPYSLV-----VAKPPTSRLVVYVPTFEDERAVSKRILNKQGYAEVEV 126
Query: 214 YRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMIIQH 393
+H + D T + +VYWN + IT GAG T V++V+L++N++ C + +
Sbjct: 127 LKHVSNFLQDV-----TDESQVVYWNCIGTITRTGAGITHVYTVVLSDNVYDCQKIEVAT 181
Query: 394 E--NPKCPIEFTYPETDMQSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSHFKELVES 567
P CP++ Y E+ + LL + +A + + + +
Sbjct: 182 SITRPLCPLQVDY-ESHVND--RTLL---------------VGEMAGDDEMIALTQKTDV 223
Query: 568 NDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLN 726
++FL+CF +T +KIL++KR + R + A + I + ++E+ ++ +L+
Sbjct: 224 DNFLICFRKDTPLGIKILNIKRYLILLSLRARRATFSIYMTYDELTIVHRELS 276
>UniRef50_Q8JS09 Cluster: Putative uncharacterized protein
PhopGV050; n=1; Phthorimaea operculella
granulovirus|Rep: Putative uncharacterized protein
PhopGV050 - Phthorimaea operculella granulovirus
Length = 339
Score = 68.9 bits (161), Expect = 1e-10
Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 7/233 (3%)
Frame = +1
Query: 49 VCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVLVYRHEH 228
+ +SD F FP+ +V+ +S++ L ++VPT +D I+ ++ F V V ++
Sbjct: 5 ITVSDAFVIFPYAMVQKKSNL-------LTIFVPTYEDESAIEIQRLT-FEVVRVKKYVS 56
Query: 229 DVNIDSRSPKKTASATIVYWNPLMPI-TEIGAGETRVFSVLLTNNLF---YCNTMIIQHE 396
N D + T + IVYWN ++PI T T VF+V+ ++NL+ + ++
Sbjct: 57 --NFDENND--TENGQIVYWNVIVPIKTFSKISNTYVFNVVFSDNLYNIPNAHIDVVDSI 112
Query: 397 NPKCPIEFTYPETDM---QSACSALLKNRNGQSVPPPIKSNLRPIACEIPLSHFKELVES 567
N +CP++ Y T M + C+ L + R+ IK+N
Sbjct: 113 NMRCPLQINYNPTKMVYLEGECAGLSQTRD------IIKNN------------------- 147
Query: 568 NDFLLCFNLETSTMVKILSLKRIFCIFQYRKQPARYVINLPHEEIDNLYNKLN 726
+ FL+ FN T VKIL+ KR+ + + +++ I LP EEI N++ +L+
Sbjct: 148 SQFLIVFNKNTPMGVKILNTKRLLILMGLLNKNSQFHIYLPPEEIMNIHKELS 200
>UniRef50_Q6JK90 Cluster: Putative uncharacterized protein; n=3;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Neodiprion sertifer NPV
Length = 357
Score = 39.9 bits (89), Expect = 0.062
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 4/133 (3%)
Frame = +1
Query: 31 CPFQIQVCISDRFFAFPHNLVEPQSD----VGNKLIENLIVYVPTDDDRLYIDKKQFPKF 198
C QV ISD + NL+ +++ K L V V ++D I Q F
Sbjct: 4 CSHLDQVIISDEYLFPSKNLIVREAENLPITIPKSTSILCVIVSIEEDIEIIGDVQ-TGF 62
Query: 199 NSVLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNT 378
+ L+ D +D+ +VY P+ PIT G T VFS LTN L+ C +
Sbjct: 63 SETLITTQHDDGVLDN--------VVVVYLTPIQPITTYGILGTFVFSGFLTNFLYDCKS 114
Query: 379 MIIQHENPKCPIE 417
+ + CP++
Sbjct: 115 AFLFKKMIFCPVQ 127
>UniRef50_Q23PW6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 4882
Score = 34.7 bits (76), Expect = 2.3
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 415 EFTYPETDMQSACSALLKNRNGQSVPPPI--KSNLRPIACEIPLSHFKELVESNDFL 579
E TY + ++ ++L +++ SV K+N PI CE+ L HF+ L+E N L
Sbjct: 382 EKTYKSDNSENTENSLNSSKSDDSVKSTEDNKNNSFPIICEVHLGHFEILIEENSML 438
>UniRef50_A7E511 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 463
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +1
Query: 85 NLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVLVYRHEHDVNIDSRSPKKT 264
N++E Q + GN+LI++L++Y+ T ++ L + + K +D ++D +K+
Sbjct: 13 NILEAQRETGNELIKDLLIYIETVENNLRHENDRLTK--------ELNDAHLDLDDSRKS 64
Query: 265 ASATIVYWN 291
++WN
Sbjct: 65 RRELQIHWN 73
>UniRef50_Q7QQJ3 Cluster: GLP_238_5046_9479; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_238_5046_9479 - Giardia lamblia ATCC
50803
Length = 1477
Score = 33.9 bits (74), Expect = 4.1
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = -1
Query: 275 VADAVFFGDRLSILTSCSCLYTSTELNFGNCFLSMYNRSSSVGTYTIKFSINLLP 111
+A +FFG+ LS LT CL +T + G+ N SS + TY IK ++++ P
Sbjct: 465 LAHDIFFGNELSSLTQDKCLQYATAVVLGHYPAHRANYSSDL-TYFIKSAMSVCP 518
>UniRef50_A0CSZ2 Cluster: Chromosome undetermined scaffold_261, whole
genome shotgun sequence; n=11; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_261,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 3013
Score = 33.9 bits (74), Expect = 4.1
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = -1
Query: 404 LGFSCWMIIVLQ*NKLLVRST-LKTRV-SPAPISVMGINGFQYTMVADAVFFGDRLSILT 231
LG SC LQ N L S LK + S S + NG Q + R+ I T
Sbjct: 861 LGNSCLCKTKLQGNYLTTYSAPLKINLFSVCHYSCLSCNGPQVNQCLSCLNSESRILIST 920
Query: 230 SCSCLYTSTELNFGNCFLSMYNRSSSVGTYTIKFSINLLPTS 105
SC C + ++N NC Y G T++ N P+S
Sbjct: 921 SCICTENTFDINVPNCQKCDYR---CEGCTTLRTQCNACPSS 959
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,686,534
Number of Sequences: 1657284
Number of extensions: 15213019
Number of successful extensions: 40249
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 38776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40235
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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